| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_1534 |
|---|
| Symbol | |
|---|
| ID | 5114502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | - |
|---|
| Start bp | 1687154 |
|---|
| End bp | 1689082 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640491721 |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_001176264 |
|---|
| Protein GI | 146311190 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.376143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.346331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAA TTCTGGCTGG CATCATTTTT TTCCTTTTTA TATCTACCGG GTATATCTCT
TTCCTTGTGC ATGAAAGGCA GCAAGAGTTA CAGAAACTGA CTCACTACGC CGCTGCCTGG
TCTGCTGCAC AGATGGTATC AGAATATTAC CGGTTTGAAT CGGTGCTTGG TCTTTACACT
AGCGACGAGA CGATAACGCT GGATGATGTG CGCATGCGTC TCGACATTAT GCTCAGCCAG
AGCGATTTAA TGAAAGAAGG TGATCTGAGG AATTATATCG AAAGTAATAA AGCCTATCAT
GCGCTTGCGC TACAGCTTGA AAAGAAACTT GAGTATCTGG ATATTCATCT TGACAAGATG
AACCGCTCAG AGCTCCAGGC ATACCTGAAA ACAATGCAGA CGCTGGATGC CCCCCTGAGC
CGTCTATCGT CCGGCGCGTT AGACAAAGAT ATTAACTCAA TTAATGACGC CAACCACAAA
ATCAAAACTC TGTACTATAT TTACTCAGCA ACGTCTGTAT TGCTGATAAT AATGAGTGCG
ATCCTGGGTT TGCTGATATT TTATCAAAAC AGAAATATTC AGAAAGCACA TCTTCAGGTA
AAAAATCTGG CTGAAGAACT GCAGGAATCG AAAGAAAAAC TGCAGGTCCA GAATACAAAG
CTGGAATATG ACGTCTACCA CGACTCTCTG ACCGAGATGA ATAACCGCCA TTTTTTTTGG
GGCAACTTAA ATGAGACCAT CGAGAACGCA GTAAAAAGCA ATAATACTGT GACTGTGATG
TTGTTTGATT TAGATCGATT CAAGGTTGTC AATGATACGT ATGGTCATGA TGTCGGTGAT
ATGTTATTAC GCCAGATATC ACAACGTCTG ATTTCGATGG GCCTGACGTC CGATACGCTG
TATCGTTTAG GCGGTGATGA ATTTGCGTTT CTTTCGAGTG GCCTGACGGA AAGCAGTGCC
GTTTCACTCG CCCAAAATAT ATGCGATGCG ATCAACCAGC CTTACACTAT TTATAATACG
ATTATCAATA TAACTACCAG TGTCGGCATT GTTATCTCAG ACACTGAACG CCGCTCAGAC
TATCTCTATA AATTTGCCGA TCTGGCCCTT TATGAAGCCA AAAATGAAGG CGCGGGTAAG
ATAAAAGTTT TCCGGCAATG GATGTTAGAC AAGCTGCAAG AAAGCCGAAC CCTTGAGCAT
GATATGGCGC TGGCGTTAGC AAATAAAGAA TTCGTGGTTT ATTATCAGCC TATTGTTGAT
TCCTTCACAC AGGAAATTTA CAGCTATGAA GCCCTTATTC GTTGGATTCA CCCTCTAAAA
GGCATCCTGT CGCCGGACAC CTTTATTCCT GTGGCTGAAA AAACAGGAAT GATAAACGAG
ATGGGGAAAT CAATGCTTGA AATGGCCTGC CGGGAAGCCG TTTCCTGGGT AATTCCGGCT
AAAATTTCAG TGAATGTCTC TCCTGTCCAG TTAAGCAGCA AAGCCTTTGC CGGAATAGTG
GTGTCTATTC TGAACGAAAC GGGACTTTCG GCTGAACGCC TTGAACTGGA AGTGACTGAA
TCCTCTCTCT TTACTGAGAG CAAAACGCCG ATGAATACGC TTAACAGGCT GCGGACTCTG
GGGGTGAAAA TATCCATCGA TGATTTTGGT ACCGGTTATT CTTCTCTTTC GCGCCTCAGC
AGACTTGCCT TCGATAAAAT CAAAATCGAC AAGTCCTTTG TCAATTCGGT ATCGACACAG
GAAGACGCCC TTAATATCAT CAGGCTCATC ACCGGCATGG CGAAATCGCT TAATATGAAG
ACCGTTGCAG AAGGTGTTGA AACACAGGAG CAACTGGAAA GCCTTCAGGC GCTGGGCTGC
GATTTCATAC AAGGCTATCT GTTTGGTAAA CCTCAGCCTT ATATAGATGG GAAAATCAGA
AACGGTTGA
|
|---|
| Protein sequence | MNRILAGIIF FLFISTGYIS FLVHERQQEL QKLTHYAAAW SAAQMVSEYY RFESVLGLYT
SDETITLDDV RMRLDIMLSQ SDLMKEGDLR NYIESNKAYH ALALQLEKKL EYLDIHLDKM
NRSELQAYLK TMQTLDAPLS RLSSGALDKD INSINDANHK IKTLYYIYSA TSVLLIIMSA
ILGLLIFYQN RNIQKAHLQV KNLAEELQES KEKLQVQNTK LEYDVYHDSL TEMNNRHFFW
GNLNETIENA VKSNNTVTVM LFDLDRFKVV NDTYGHDVGD MLLRQISQRL ISMGLTSDTL
YRLGGDEFAF LSSGLTESSA VSLAQNICDA INQPYTIYNT IINITTSVGI VISDTERRSD
YLYKFADLAL YEAKNEGAGK IKVFRQWMLD KLQESRTLEH DMALALANKE FVVYYQPIVD
SFTQEIYSYE ALIRWIHPLK GILSPDTFIP VAEKTGMINE MGKSMLEMAC REAVSWVIPA
KISVNVSPVQ LSSKAFAGIV VSILNETGLS AERLELEVTE SSLFTESKTP MNTLNRLRTL
GVKISIDDFG TGYSSLSRLS RLAFDKIKID KSFVNSVSTQ EDALNIIRLI TGMAKSLNMK
TVAEGVETQE QLESLQALGC DFIQGYLFGK PQPYIDGKIR NG
|
|---|
| |