Gene Ent638_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_1430 
SymbolrpsA 
ID5114395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp1574794 
End bp1576467 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content50% 
IMG OID640491616 
Product30S ribosomal protein S1 
Protein accessionYP_001176161 
Protein GI146311087 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00086358 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAT CTTTTGCTCA ACTATTTGAA GAATCCTTAA AAACAATCGA AACCCGTCCG 
GGTTCCATCG TTCGTGGTGT TGTTGTTGCT ATCGACAAAG ATATCGTACT GGTTGACGCC
GGTCTGAAAT CTGAGTCTGC CATTCCGGCA GAGCAGTTCA AAAACGCCCA GGGCGAGCTG
GAAATCCAGG TAGGTGACGA AGTTGACGTT GCACTGGATG CAGTAGAAGA CGGCTTCGGT
GAAACTCTGC TGTCCCGTGA GAAAGCTAAA CGTCACGAAG CTTGGATCAC GCTGGAAAAA
GCTTACGAAG AAGCTGAAAC TGTCGTCGGT GTTATCAACG GCAAAGTTAA AGGTGGCTTC
ACTGTTGAGC TGAACGGTAT TCGCGCGTTC CTGCCAGGTT CACTGGTAGA CGTTCGTCCT
GTTCGCGATA CTCTGCACCT CGAAGGCAAA GAGCTCGAGT TCAAAGTCAT CAAGCTGGAC
CAGAAGCGTA ACAACGTTGT TGTTTCTCGT CGTGCAGTTA TCGAATCCGA GAACAGCGCA
GAGCGCGATC AGCTGCTGGA AAACCTGCAG GAAGGCATGG AAGTCAAAGG TATCGTTAAG
AACCTCACTG ACTACGGCGC ATTCGTTGAT CTGGGTGGCG TTGATGGCCT GTTGCACATC
ACCGACATGG CGTGGAAACG CGTTAAGCAT CCAAGCGAAA TCGTAAACGT TGGCGACGAA
ATCACTGTTA AAGTGCTGAA GTTCGACCGC GAGCGTACCC GTGTTTCCCT GGGCCTGAAA
CAGCTTGGCG AAGATCCATG GGTCGCTATC GCTAAACGTT ACCCAGAAGG TACTAAACTG
ACTGGTCGCG TTACCAACCT GACTGACTAC GGCTGCTTCG TTGAAATCGA AGAAGGCGTT
GAAGGCCTGG TTCACGTTTC CGAAATGGAT TGGACCAACA AAAACATCCA CCCATCCAAA
GTTGTTAACG TTGGTGATGT AGTGGAAGTT ATGGTTCTGG ATATCGACGA AGAACGTCGT
CGTATCTCCC TGGGCCTGAA ACAGTGCAAA AACAACCCAT GGCAGCAGTT CGCGGAAACC
CACAACAAGG GCGACCGTGT TGAAGGTAAA ATCAAGTCTA TCACTGACTT CGGTATCTTC
ATCGGCCTGG ACGGCGGCAT CGACGGCCTG GTTCACCTGT CTGACATCTC CTGGAACGCT
ACAGGCGAAG AAGCAGTTCG TGAATACAAA AAAGGCGACG AAATCGCAGC GGTTGTTCTG
CAGGTTGACG CAGAACGTGA GCGTATCTCT CTGGGCGTTA AACAGCTCGC AGAAGATCCG
TTCAACAACT GGGTTGCTGT GAACAAGAAA GGCGCAATCG TAAACGGTAA AGTGACTGCA
GTTGACGCTA AAGGCGCAAC CGTAGAACTG GCTGACGGCG TTGAAGGTTA CCTGCGTGCT
TCTGAAGCTT CACGTGACCG CGTTGAAGAT GCGACTCTGG TTCTCAACGT TGGCGACGAT
GTTGAAGCTA AGTTCACCGG TGTTGACCGT AAGAACCGTG CAATCAGCCT GTCTGTTCGT
GCTAAAGACG AAGCTGATGA GAAAGATGCA ATCGCAACTG TTAACAAACA GGAAGATGCT
GGTTTCTCCA ACAACGCAAT GGCTGAAGCT TTCAAAGCAG CTAAAGGCGA GTAA
 
Protein sequence
MTESFAQLFE ESLKTIETRP GSIVRGVVVA IDKDIVLVDA GLKSESAIPA EQFKNAQGEL 
EIQVGDEVDV ALDAVEDGFG ETLLSREKAK RHEAWITLEK AYEEAETVVG VINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSA
ERDQLLENLQ EGMEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
ITVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPEGTKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDVVEV MVLDIDEERR RISLGLKQCK NNPWQQFAET
HNKGDRVEGK IKSITDFGIF IGLDGGIDGL VHLSDISWNA TGEEAVREYK KGDEIAAVVL
QVDAERERIS LGVKQLAEDP FNNWVAVNKK GAIVNGKVTA VDAKGATVEL ADGVEGYLRA
SEASRDRVED ATLVLNVGDD VEAKFTGVDR KNRAISLSVR AKDEADEKDA IATVNKQEDA
GFSNNAMAEA FKAAKGE