| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_1430 |
|---|
| Symbol | rpsA |
|---|
| ID | 5114395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | + |
|---|
| Start bp | 1574794 |
|---|
| End bp | 1576467 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640491616 |
|---|
| Product | 30S ribosomal protein S1 |
|---|
| Protein accession | YP_001176161 |
|---|
| Protein GI | 146311087 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0539] Ribosomal protein S1 |
|---|
| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00086358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTCA ACTATTTGAA GAATCCTTAA AAACAATCGA AACCCGTCCG
GGTTCCATCG TTCGTGGTGT TGTTGTTGCT ATCGACAAAG ATATCGTACT GGTTGACGCC
GGTCTGAAAT CTGAGTCTGC CATTCCGGCA GAGCAGTTCA AAAACGCCCA GGGCGAGCTG
GAAATCCAGG TAGGTGACGA AGTTGACGTT GCACTGGATG CAGTAGAAGA CGGCTTCGGT
GAAACTCTGC TGTCCCGTGA GAAAGCTAAA CGTCACGAAG CTTGGATCAC GCTGGAAAAA
GCTTACGAAG AAGCTGAAAC TGTCGTCGGT GTTATCAACG GCAAAGTTAA AGGTGGCTTC
ACTGTTGAGC TGAACGGTAT TCGCGCGTTC CTGCCAGGTT CACTGGTAGA CGTTCGTCCT
GTTCGCGATA CTCTGCACCT CGAAGGCAAA GAGCTCGAGT TCAAAGTCAT CAAGCTGGAC
CAGAAGCGTA ACAACGTTGT TGTTTCTCGT CGTGCAGTTA TCGAATCCGA GAACAGCGCA
GAGCGCGATC AGCTGCTGGA AAACCTGCAG GAAGGCATGG AAGTCAAAGG TATCGTTAAG
AACCTCACTG ACTACGGCGC ATTCGTTGAT CTGGGTGGCG TTGATGGCCT GTTGCACATC
ACCGACATGG CGTGGAAACG CGTTAAGCAT CCAAGCGAAA TCGTAAACGT TGGCGACGAA
ATCACTGTTA AAGTGCTGAA GTTCGACCGC GAGCGTACCC GTGTTTCCCT GGGCCTGAAA
CAGCTTGGCG AAGATCCATG GGTCGCTATC GCTAAACGTT ACCCAGAAGG TACTAAACTG
ACTGGTCGCG TTACCAACCT GACTGACTAC GGCTGCTTCG TTGAAATCGA AGAAGGCGTT
GAAGGCCTGG TTCACGTTTC CGAAATGGAT TGGACCAACA AAAACATCCA CCCATCCAAA
GTTGTTAACG TTGGTGATGT AGTGGAAGTT ATGGTTCTGG ATATCGACGA AGAACGTCGT
CGTATCTCCC TGGGCCTGAA ACAGTGCAAA AACAACCCAT GGCAGCAGTT CGCGGAAACC
CACAACAAGG GCGACCGTGT TGAAGGTAAA ATCAAGTCTA TCACTGACTT CGGTATCTTC
ATCGGCCTGG ACGGCGGCAT CGACGGCCTG GTTCACCTGT CTGACATCTC CTGGAACGCT
ACAGGCGAAG AAGCAGTTCG TGAATACAAA AAAGGCGACG AAATCGCAGC GGTTGTTCTG
CAGGTTGACG CAGAACGTGA GCGTATCTCT CTGGGCGTTA AACAGCTCGC AGAAGATCCG
TTCAACAACT GGGTTGCTGT GAACAAGAAA GGCGCAATCG TAAACGGTAA AGTGACTGCA
GTTGACGCTA AAGGCGCAAC CGTAGAACTG GCTGACGGCG TTGAAGGTTA CCTGCGTGCT
TCTGAAGCTT CACGTGACCG CGTTGAAGAT GCGACTCTGG TTCTCAACGT TGGCGACGAT
GTTGAAGCTA AGTTCACCGG TGTTGACCGT AAGAACCGTG CAATCAGCCT GTCTGTTCGT
GCTAAAGACG AAGCTGATGA GAAAGATGCA ATCGCAACTG TTAACAAACA GGAAGATGCT
GGTTTCTCCA ACAACGCAAT GGCTGAAGCT TTCAAAGCAG CTAAAGGCGA GTAA
|
|---|
| Protein sequence | MTESFAQLFE ESLKTIETRP GSIVRGVVVA IDKDIVLVDA GLKSESAIPA EQFKNAQGEL
EIQVGDEVDV ALDAVEDGFG ETLLSREKAK RHEAWITLEK AYEEAETVVG VINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSA
ERDQLLENLQ EGMEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
ITVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPEGTKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDVVEV MVLDIDEERR RISLGLKQCK NNPWQQFAET
HNKGDRVEGK IKSITDFGIF IGLDGGIDGL VHLSDISWNA TGEEAVREYK KGDEIAAVVL
QVDAERERIS LGVKQLAEDP FNNWVAVNKK GAIVNGKVTA VDAKGATVEL ADGVEGYLRA
SEASRDRVED ATLVLNVGDD VEAKFTGVDR KNRAISLSVR AKDEADEKDA IATVNKQEDA
GFSNNAMAEA FKAAKGE
|
|---|
| |