Gene Ent638_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_0879 
Symbol 
ID5111068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp980083 
End bp980967 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content50% 
IMG OID640491055 
Productnucleoside-specific channel-forming protein, Tsx 
Protein accessionYP_001175614 
Protein GI146310540 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3248] Nucleoside-binding outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.543775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGA AAAAAACATT ATTAGCAGCC GGTGCAGCGC TGGCACTTTC CTCTTCTTTC 
GCTGTTAACG CAGCAGAGAA CGCAAAACCT GAGTATGTTT CCGACTGGTG GCACCAGAGC
GTCAACGTCG TTGGTAGCTA CCACACCCGC TTTGGGCCGC AAATCCGTAA CGATACCTAT
CTGGAATATG AAGCTTTCGC TAAGAAAGAC TGGTTTGATT TCTATGGTTA CATGGACGCG
CCAGTATTCT TCGGTGGTAA CACCGAAGCG AAAGGTATCT GGAACCATGG TTCTCCACTG
TTTATGGAAA TCGAGCCGCG CTTCTCTATC GACAAGCTGA CAGGCGCAGA TCTGAGCTTC
GGTCCATTTA AAGAGTGGTA TATCGCGAAC AACTATATTT ACGATATGGG TCGCAACGCT
TCCGGTCGCC AGAGTACCTG GTATATGGGT CTGGGTACTG ACATCGACAC CGGTCTGCCG
ATGAGCCTGT CCATGAACGT GTATGCGAAA TACCAGTGGC AGAACTACGA TTCAGCAAAC
GCGAATGAAT GGGATGGCTA CCGTTTCAAA GTGAAATACT TTGTGCCGAT CACCCAGCTG
TGGGGTGGCA ACCTGAGCTA TATTGGCTTC ACCAACTTCG ACTGGGGTTC AGAACTGGGC
GATAAGAGCG ATTACGCTGA GAACGGTATT AAGGAGCGTA CCAACGACTC TATCGCGTCC
AGCCACATTC TGGCCCTGAA CTACGATCAC TGGCATTACT CAGTGGTTGC ACGTTACTGG
CACAACGGCG GTCAGTGGAA CGACGATGCC GACCTGAAAT GGATGAAAGA AAACGTCCGT
TCTACCGGTT GGGGTGGATA CCTGGTCGTA GGTTACAACT TCTAA
 
Protein sequence
MIMKKTLLAA GAALALSSSF AVNAAENAKP EYVSDWWHQS VNVVGSYHTR FGPQIRNDTY 
LEYEAFAKKD WFDFYGYMDA PVFFGGNTEA KGIWNHGSPL FMEIEPRFSI DKLTGADLSF
GPFKEWYIAN NYIYDMGRNA SGRQSTWYMG LGTDIDTGLP MSLSMNVYAK YQWQNYDSAN
ANEWDGYRFK VKYFVPITQL WGGNLSYIGF TNFDWGSELG DKSDYAENGI KERTNDSIAS
SHILALNYDH WHYSVVARYW HNGGQWNDDA DLKWMKENVR STGWGGYLVV GYNF