Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ent638_0544 |
Symbol | deoD |
ID | 5112176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Enterobacter sp. 638 |
Kingdom | Bacteria |
Replicon accession | NC_009436 |
Strand | + |
Start bp | 610881 |
End bp | 611603 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640490715 |
Product | purine nucleoside phosphorylase |
Protein accession | YP_001175282 |
Protein GI | 146310208 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0813] Purine-nucleoside phosphorylase |
TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.353867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0917006 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTACCC CACATATTAA TGCAGAAATG GGCGATTTCG CTGACGTCGT GTTGATGCCT GGCGATCCGC TGCGCGCGAA GCACATTGCT GAAACTTTCC TCGAAGACGT GCGTGAAGTG AACAACGTGC GTGGCATGTT GGGCTTCACC GGGACGTATA AAGGCCGCAA AATCTCCGTA ATGGGTCACG GCATGGGTAT CCCATCCTGC TCCATCTACA CCAAAGAGCT GATCACCGAT TTCGGCGTGA AGAAAATCAT TCGCGTGGGC TCTTGTGGCG CTGTGCGCAT GGACGTGAAA CTGCGTGACG TGGTTATCGG AATGGGTGCT TGCACCGATT CCAAAGTGAA CCGTATGCGT TTTAAAGATC ACGACTTTGC TGCGATCGCT GACTTCGGCA TGGTGCGTAA CGCGGTTGAC GCTGCGAAAG CGCTGGGCGT TGACGCGCGC GTCGGTAACA TCTTCTCTGC TGACCTGTTC TATTCTCCGG ACGGCGGCGA AATGTTCGAC GTGATGGAAA AGTACGGCAT CCTGGGCGTG GAAATGGAAG CTGCGGGCAT CTACGGCGTT GCGGCTGAGT TCGGTGCGAA AGCGCTGACC ATCTGTACCG TGTCTGACCA CATCCGTACT CATGAGCAGA CTTCTGCTGC TGAGCGTCAG ACCACTTTCA ACGACATGAT CAAAATCGCG CTGGAATCCG TTCTGCTGGG CGATAAAGAG TAA
|
Protein sequence | MATPHINAEM GDFADVVLMP GDPLRAKHIA ETFLEDVREV NNVRGMLGFT GTYKGRKISV MGHGMGIPSC SIYTKELITD FGVKKIIRVG SCGAVRMDVK LRDVVIGMGA CTDSKVNRMR FKDHDFAAIA DFGMVRNAVD AAKALGVDAR VGNIFSADLF YSPDGGEMFD VMEKYGILGV EMEAAGIYGV AAEFGAKALT ICTVSDHIRT HEQTSAAERQ TTFNDMIKIA LESVLLGDKE
|
| |