Gene Ent638_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_0198 
Symbol 
ID5112862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp230120 
End bp234343 
Gene Length4224 bp 
Protein Length1407 aa 
Translation table11 
GC content52% 
IMG OID640490360 
ProductDNA-directed RNA polymerase subunit beta' 
Protein accessionYP_001174939 
Protein GI146309865 
COG category[K] Transcription 
COG ID[COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit 
TIGRFAM ID[TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.329486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.063927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGATT TATTAAAGTT TCTGAAAGCG CAGACTAAAA CCGAAGAGTT TGATGCGATC 
AAAATTGCTC TGGCCTCGCC AGACATGATC CGTTCATGGT CTTTCGGTGA AGTTAAGAAG
CCGGAAACCA TCAACTACCG TACGTTCAAA CCTGAGCGTG ACGGCCTTTT CTGTGCGCGT
ATTTTCGGGC CAGTAAAAGA CTATGAGTGC CTGTGCGGTA AGTACAAGCG CCTGAAACAC
CGTGGTGTGA TTTGTGAGAA GTGCGGCGTT GAAGTGACCC AGACTAAAGT GCGTCGTGAA
CGCATGGGGC ACATCGAGCT GGCGTCTCCG ACTGCTCACA TCTGGTTCCT GAAATCTCTG
CCGTCCCGTA TCGGCCTGCT GCTGGATATG CCGCTGCGCG ATATCGAACG TGTTCTGTAC
TTCGAATCTT ATGTGGTTAT CGAAGGCGGT ATGACGAATC TGGAACGTAA TCAGATTCTG
ACCGAAGAAC AGTATCTGGA CGCGCTGGAA GAGTTCGGTG ACGAATTCGA CGCGAAGATG
GGTGCGGAAG CGATCCAGGC CCTGTTGAAA AACATGGATC TGGAGCAAGA GTGCGAGCAG
CTTCGTCAGG AGCTGAACGA AACTAACTCC GAAACCAAGC GTAAAAAGCT GACCAAGCGT
ATCAAACTGC TGGAAGCGTT TGTCCTGTCT GGTAACAAGC CAGAGTGGAT GATCCTGACC
GTTCTGCCGG TTCTGCCGCC AGATCTGCGT CCATTGGTTC CGCTGGATGG TGGTCGTTTT
GCGACGTCTG ACCTGAACGA TCTGTATCGT CGCGTCATTA ACCGTAACAA CCGTCTGAAA
CGCCTGCTCG ACTTGGCTGC GCCTGACATC ATTGTACGTA ACGAAAAACG TATGCTGCAG
GAAGCGGTTG ATGCCCTGCT GGATAACGGT CGTCGTGGTC GTGCGATTAC AGGTTCTAAC
AAGCGTCCTC TGAAATCTTT GGCCGATATG ATCAAAGGTA AGCAGGGTCG TTTCCGTCAG
AACTTGCTCG GTAAGCGTGT TGACTACTCT GGTCGTTCTG TTATCACCGT AGGCCCATAC
CTGCGCCTGC ATCAGTGCGG TCTGCCGAAG AAAATGGCAC TGGAGCTGTT CAAACCGTTC
ATCTACGGCA AGCTGGAACT GCGTGGTCTT GCTACCACCA TTAAAGCTGC GAAGAAGATG
GTTGAGCGTG AAGAAGCTGT CGTTTGGGAT ATCCTGGACG AAGTTATCCG CGAACACCCG
GTACTGCTGA ACCGTGCACC AACTCTGCAC CGTTTGGGTA TCCAGGCATT CGAGCCAGTA
CTGATCGAAG GTAAAGCTAT CCAGCTGCAC CCGCTGGTTT GTGCGGCTTA TAACGCCGAC
TTCGATGGTG ACCAGATGGC AGTACACGTT CCACTGACGC TTGAAGCTCA GTTGGAAGCG
CGTGCGCTGA TGATGTCTAC CAACAACATC CTGTCACCTG CGAACGGCGA GCCAATCATC
GTTCCGTCTC AGGACGTTGT ATTGGGTCTG TACTACATGA CCCGTGACTG TGTTAACGCC
AAAGGCGAAG GCATGGTGCT GTCTGGCCCT AAAGAAGCTG AGCGTATCTA TCGCGCAGGT
CTGGCCTCAC TGCATGCGCG TGTCAAAGTG CGTATCACTG AATATGAAAA AGATGCTAAC
GACGAGTTCG TTGGTAAAAC CAGCATTATC GACACTACCG TAGGTCGTGC GATTTTGTGG
ATGATCGTAC CGAAAGGTCT GCCTTACTCT ATCGTCAACC AGGCGCTGGG CAAGAAGGCA
ATCTCCAAAA TGCTGAACAC CTGTTACCGT ATTCTGGGTC TGAAGCCTAC GGTAATCTTT
GCTGACCAAA CGATGTACAC CGGCTTTGCT TATGCAGCGC GTTCAGGTGT CTCCGTTGGT
ATCGATGACA TGGTCATCCC AGCCAAGAAA ACTGAGATCA TTTCTGAAGC GGAAGCGGAA
GTTGCTGAGA TTCAGGAGCA GTTCCAGTCT GGTCTGGTAA CCGCAGGTGA GCGTTACAAC
AAAGTTATCG ATATCTGGGC AGCGGCGAAC GATCGTGTTT CCAAAGCGAT GATGGATAAC
CTGCAAACTG AAACCGTAAC TAACCGTGAC GGCGTGGAAG AGCAGCAGGT TTCCTTCAAC
AGTATCTACA TGATGGCCGA CTCCGGTGCG CGTGGTTCAG CAGCACAGAT TCGTCAGTTG
GCAGGTATGC GTGGTCTGAT GGCTAAGCCA GATGGCTCAA TCATCGAAAC GCCAATCACC
GCGAACTTCC GTGAAGGTCT GAACGTACTC CAGTACTTCA TCTCCACGCA CGGTGCGCGT
AAAGGTCTGG CGGATACCGC ACTGAAAACG GCTAACTCCG GTTATCTGAC TCGTCGTCTG
GTTGACGTCG CGCAGGATCT GGTTGTGACC GAAGATGACT GTGGAACTCA CGAAGGCATC
CTGATGACTC CGGTTATCGA AGGTGGCGAC GTCAAAGAAC CACTGCGCGA CCGCGTTCTG
GGTCGTGTAA CGGCTGAAGA TATCATCAAG CCGGGTACGG CTGATATCCT GGTAACACGT
AACACGCTGC TCGATGAGCA ATGGTGTGAC CTGTTAGAAC TCAACTCTGT TGATAGCGTG
AAAGTACGTT CCGTAGTAGG TTGCGAAACT GACTTTGGCG TCTGTGCACA CTGCTATGGT
CGCGACCTGG CTCGTGGTCA CATCATCAAC AAAGGTGAAG CAATCGGGGT TATCGCGGCA
CAGTCTATCG GTGAGCCGGG TACACAGCTG ACGATGCGTA CGTTCCACAT CGGTGGTGCG
GCATCTCGTT CCGCTGCTGA ATCCAGCATC CAGGTGAAAA ACAAAGGTAG CATCAAGCTC
AGCAACGCGA AGTCTGTTGT GAACTCTGCC GGTAAACTGG TAGTGACTTC TCGTAACACC
GAGCTGAAAC TGATCGACGA ATTCGGTCGT ACCAAAGAAA GCTACAAAGT GCCTTACGGT
GCGGTAATGG GCAAAGGCGA TGGCGAGCAG GTTGCAGGCG GCGAAACCGT TGCAAACTGG
GATCCACACA CCATGCCAGT TATCACCGAA GTGAGTGGTT TCATTCGCTT CACCGATATG
ATCGACGGCC AGACGATTAC TCGTCAGACC GACGAACTGA CCGGTCTGTC TTCGTTGGTT
GTTCTGGATT CTGCAGAACG TACCGCGGGC GGTAAAGATC TGCGTCCAGC GTTGAAAATC
ATTGATGCCA ACGGTAATGA TGTTCTGATC CCAGGCACCG ATATGCCTGC TCAGTACTTC
CTGCCAGGTA AAGCGATTGT TCAGCTCGAA GATGGTATCC AGATCAGTGC GGGTGACGCT
CTGGCGCGTA TTCCTCAGGA ATCCAGCGGT ACCAAGGATA TTACCGGTGG TCTGCCACGC
GTTGCTGACC TGTTTGAAGC ACGTCGTCCG AAAGAGCCTG CAATCCTGGC GGAAATTACC
GGCATCATTT CCTTCGGTAA AGAAACCAAA GGCAAACGTC GTCTGGTTAT CACTCCGTTA
GACGGTAGCG AGCCTTACGA AGAGATGATT CCGAAATGGC GTCAGCTCAA CGTGTTTGAA
GGTGAACGTG TAGAACGTGG TGATGTGGTT TCCGATGGTC CAGAAGCTCC ACACGACATT
CTGCGTCTTC GTGGCGTACA CGCGGTAACG CGTTATATCA CCAACGAAGT ACAGGACGTT
TACCGTCTGC AAGGCGTTAA GATTAACGAT AAGCACATTG AAGTTATCGT TCGTCAGATG
CTGCGTAAAG CAACCATCGA TAGCACGGGA AGCTCTGACT TCCTGGAAGG CGAGCAGGTG
GAATACTCTC GCGTCAAGAT TGCGAACCGC GATCTGGAAG CGAACGGTAA AGTGGCGGCG
TTGTTCTCCC GTGACTTGCT GGGTATCACC AAAGCGTCTC TGGCAACCGA GTCCTTCATC
TCTGCTGCCT CGTTCCAGGA GACCACTCGT GTCCTGACCG AAGCTGCTGT TGCGGGCAAA
CGTGATGAAC TGCGCGGTCT GAAAGAGAAC GTTATCGTGG GTCGTCTGAT CCCAGCGGGT
ACGGGTTATG CGTACCACCA GGATCGTATG CGTCGTCGTG CTGCGGGCGA ACTGCCAGCT
GCACCTCAGG TCACTGCGGA AGATGCTTCT GCAAGCCTGG CAGAACTGCT GAACGCAGGT
CTGGGCGGCT CAGACAACGA TTAA
 
Protein sequence
MKDLLKFLKA QTKTEEFDAI KIALASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR 
IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP TAHIWFLKSL
PSRIGLLLDM PLRDIERVLY FESYVVIEGG MTNLERNQIL TEEQYLDALE EFGDEFDAKM
GAEAIQALLK NMDLEQECEQ LRQELNETNS ETKRKKLTKR IKLLEAFVLS GNKPEWMILT
VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLAAPDI IVRNEKRMLQ
EAVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY
LRLHQCGLPK KMALELFKPF IYGKLELRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP
VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA
RALMMSTNNI LSPANGEPII VPSQDVVLGL YYMTRDCVNA KGEGMVLSGP KEAERIYRAG
LASLHARVKV RITEYEKDAN DEFVGKTSII DTTVGRAILW MIVPKGLPYS IVNQALGKKA
ISKMLNTCYR ILGLKPTVIF ADQTMYTGFA YAARSGVSVG IDDMVIPAKK TEIISEAEAE
VAEIQEQFQS GLVTAGERYN KVIDIWAAAN DRVSKAMMDN LQTETVTNRD GVEEQQVSFN
SIYMMADSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR
KGLADTALKT ANSGYLTRRL VDVAQDLVVT EDDCGTHEGI LMTPVIEGGD VKEPLRDRVL
GRVTAEDIIK PGTADILVTR NTLLDEQWCD LLELNSVDSV KVRSVVGCET DFGVCAHCYG
RDLARGHIIN KGEAIGVIAA QSIGEPGTQL TMRTFHIGGA ASRSAAESSI QVKNKGSIKL
SNAKSVVNSA GKLVVTSRNT ELKLIDEFGR TKESYKVPYG AVMGKGDGEQ VAGGETVANW
DPHTMPVITE VSGFIRFTDM IDGQTITRQT DELTGLSSLV VLDSAERTAG GKDLRPALKI
IDANGNDVLI PGTDMPAQYF LPGKAIVQLE DGIQISAGDA LARIPQESSG TKDITGGLPR
VADLFEARRP KEPAILAEIT GIISFGKETK GKRRLVITPL DGSEPYEEMI PKWRQLNVFE
GERVERGDVV SDGPEAPHDI LRLRGVHAVT RYITNEVQDV YRLQGVKIND KHIEVIVRQM
LRKATIDSTG SSDFLEGEQV EYSRVKIANR DLEANGKVAA LFSRDLLGIT KASLATESFI
SAASFQETTR VLTEAAVAGK RDELRGLKEN VIVGRLIPAG TGYAYHQDRM RRRAAGELPA
APQVTAEDAS ASLAELLNAG LGGSDND