Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ent638_0198 |
Symbol | |
ID | 5112862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Enterobacter sp. 638 |
Kingdom | Bacteria |
Replicon accession | NC_009436 |
Strand | + |
Start bp | 230120 |
End bp | 234343 |
Gene Length | 4224 bp |
Protein Length | 1407 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640490360 |
Product | DNA-directed RNA polymerase subunit beta' |
Protein accession | YP_001174939 |
Protein GI | 146309865 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.329486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.063927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGATT TATTAAAGTT TCTGAAAGCG CAGACTAAAA CCGAAGAGTT TGATGCGATC AAAATTGCTC TGGCCTCGCC AGACATGATC CGTTCATGGT CTTTCGGTGA AGTTAAGAAG CCGGAAACCA TCAACTACCG TACGTTCAAA CCTGAGCGTG ACGGCCTTTT CTGTGCGCGT ATTTTCGGGC CAGTAAAAGA CTATGAGTGC CTGTGCGGTA AGTACAAGCG CCTGAAACAC CGTGGTGTGA TTTGTGAGAA GTGCGGCGTT GAAGTGACCC AGACTAAAGT GCGTCGTGAA CGCATGGGGC ACATCGAGCT GGCGTCTCCG ACTGCTCACA TCTGGTTCCT GAAATCTCTG CCGTCCCGTA TCGGCCTGCT GCTGGATATG CCGCTGCGCG ATATCGAACG TGTTCTGTAC TTCGAATCTT ATGTGGTTAT CGAAGGCGGT ATGACGAATC TGGAACGTAA TCAGATTCTG ACCGAAGAAC AGTATCTGGA CGCGCTGGAA GAGTTCGGTG ACGAATTCGA CGCGAAGATG GGTGCGGAAG CGATCCAGGC CCTGTTGAAA AACATGGATC TGGAGCAAGA GTGCGAGCAG CTTCGTCAGG AGCTGAACGA AACTAACTCC GAAACCAAGC GTAAAAAGCT GACCAAGCGT ATCAAACTGC TGGAAGCGTT TGTCCTGTCT GGTAACAAGC CAGAGTGGAT GATCCTGACC GTTCTGCCGG TTCTGCCGCC AGATCTGCGT CCATTGGTTC CGCTGGATGG TGGTCGTTTT GCGACGTCTG ACCTGAACGA TCTGTATCGT CGCGTCATTA ACCGTAACAA CCGTCTGAAA CGCCTGCTCG ACTTGGCTGC GCCTGACATC ATTGTACGTA ACGAAAAACG TATGCTGCAG GAAGCGGTTG ATGCCCTGCT GGATAACGGT CGTCGTGGTC GTGCGATTAC AGGTTCTAAC AAGCGTCCTC TGAAATCTTT GGCCGATATG ATCAAAGGTA AGCAGGGTCG TTTCCGTCAG AACTTGCTCG GTAAGCGTGT TGACTACTCT GGTCGTTCTG TTATCACCGT AGGCCCATAC CTGCGCCTGC ATCAGTGCGG TCTGCCGAAG AAAATGGCAC TGGAGCTGTT CAAACCGTTC ATCTACGGCA AGCTGGAACT GCGTGGTCTT GCTACCACCA TTAAAGCTGC GAAGAAGATG GTTGAGCGTG AAGAAGCTGT CGTTTGGGAT ATCCTGGACG AAGTTATCCG CGAACACCCG GTACTGCTGA ACCGTGCACC AACTCTGCAC CGTTTGGGTA TCCAGGCATT CGAGCCAGTA CTGATCGAAG GTAAAGCTAT CCAGCTGCAC CCGCTGGTTT GTGCGGCTTA TAACGCCGAC TTCGATGGTG ACCAGATGGC AGTACACGTT CCACTGACGC TTGAAGCTCA GTTGGAAGCG CGTGCGCTGA TGATGTCTAC CAACAACATC CTGTCACCTG CGAACGGCGA GCCAATCATC GTTCCGTCTC AGGACGTTGT ATTGGGTCTG TACTACATGA CCCGTGACTG TGTTAACGCC AAAGGCGAAG GCATGGTGCT GTCTGGCCCT AAAGAAGCTG AGCGTATCTA TCGCGCAGGT CTGGCCTCAC TGCATGCGCG TGTCAAAGTG CGTATCACTG AATATGAAAA AGATGCTAAC GACGAGTTCG TTGGTAAAAC CAGCATTATC GACACTACCG TAGGTCGTGC GATTTTGTGG ATGATCGTAC CGAAAGGTCT GCCTTACTCT ATCGTCAACC AGGCGCTGGG CAAGAAGGCA ATCTCCAAAA TGCTGAACAC CTGTTACCGT ATTCTGGGTC TGAAGCCTAC GGTAATCTTT GCTGACCAAA CGATGTACAC CGGCTTTGCT TATGCAGCGC GTTCAGGTGT CTCCGTTGGT ATCGATGACA TGGTCATCCC AGCCAAGAAA ACTGAGATCA TTTCTGAAGC GGAAGCGGAA GTTGCTGAGA TTCAGGAGCA GTTCCAGTCT GGTCTGGTAA CCGCAGGTGA GCGTTACAAC AAAGTTATCG ATATCTGGGC AGCGGCGAAC GATCGTGTTT CCAAAGCGAT GATGGATAAC CTGCAAACTG AAACCGTAAC TAACCGTGAC GGCGTGGAAG AGCAGCAGGT TTCCTTCAAC AGTATCTACA TGATGGCCGA CTCCGGTGCG CGTGGTTCAG CAGCACAGAT TCGTCAGTTG GCAGGTATGC GTGGTCTGAT GGCTAAGCCA GATGGCTCAA TCATCGAAAC GCCAATCACC GCGAACTTCC GTGAAGGTCT GAACGTACTC CAGTACTTCA TCTCCACGCA CGGTGCGCGT AAAGGTCTGG CGGATACCGC ACTGAAAACG GCTAACTCCG GTTATCTGAC TCGTCGTCTG GTTGACGTCG CGCAGGATCT GGTTGTGACC GAAGATGACT GTGGAACTCA CGAAGGCATC CTGATGACTC CGGTTATCGA AGGTGGCGAC GTCAAAGAAC CACTGCGCGA CCGCGTTCTG GGTCGTGTAA CGGCTGAAGA TATCATCAAG CCGGGTACGG CTGATATCCT GGTAACACGT AACACGCTGC TCGATGAGCA ATGGTGTGAC CTGTTAGAAC TCAACTCTGT TGATAGCGTG AAAGTACGTT CCGTAGTAGG TTGCGAAACT GACTTTGGCG TCTGTGCACA CTGCTATGGT CGCGACCTGG CTCGTGGTCA CATCATCAAC AAAGGTGAAG CAATCGGGGT TATCGCGGCA CAGTCTATCG GTGAGCCGGG TACACAGCTG ACGATGCGTA CGTTCCACAT CGGTGGTGCG GCATCTCGTT CCGCTGCTGA ATCCAGCATC CAGGTGAAAA ACAAAGGTAG CATCAAGCTC AGCAACGCGA AGTCTGTTGT GAACTCTGCC GGTAAACTGG TAGTGACTTC TCGTAACACC GAGCTGAAAC TGATCGACGA ATTCGGTCGT ACCAAAGAAA GCTACAAAGT GCCTTACGGT GCGGTAATGG GCAAAGGCGA TGGCGAGCAG GTTGCAGGCG GCGAAACCGT TGCAAACTGG GATCCACACA CCATGCCAGT TATCACCGAA GTGAGTGGTT TCATTCGCTT CACCGATATG ATCGACGGCC AGACGATTAC TCGTCAGACC GACGAACTGA CCGGTCTGTC TTCGTTGGTT GTTCTGGATT CTGCAGAACG TACCGCGGGC GGTAAAGATC TGCGTCCAGC GTTGAAAATC ATTGATGCCA ACGGTAATGA TGTTCTGATC CCAGGCACCG ATATGCCTGC TCAGTACTTC CTGCCAGGTA AAGCGATTGT TCAGCTCGAA GATGGTATCC AGATCAGTGC GGGTGACGCT CTGGCGCGTA TTCCTCAGGA ATCCAGCGGT ACCAAGGATA TTACCGGTGG TCTGCCACGC GTTGCTGACC TGTTTGAAGC ACGTCGTCCG AAAGAGCCTG CAATCCTGGC GGAAATTACC GGCATCATTT CCTTCGGTAA AGAAACCAAA GGCAAACGTC GTCTGGTTAT CACTCCGTTA GACGGTAGCG AGCCTTACGA AGAGATGATT CCGAAATGGC GTCAGCTCAA CGTGTTTGAA GGTGAACGTG TAGAACGTGG TGATGTGGTT TCCGATGGTC CAGAAGCTCC ACACGACATT CTGCGTCTTC GTGGCGTACA CGCGGTAACG CGTTATATCA CCAACGAAGT ACAGGACGTT TACCGTCTGC AAGGCGTTAA GATTAACGAT AAGCACATTG AAGTTATCGT TCGTCAGATG CTGCGTAAAG CAACCATCGA TAGCACGGGA AGCTCTGACT TCCTGGAAGG CGAGCAGGTG GAATACTCTC GCGTCAAGAT TGCGAACCGC GATCTGGAAG CGAACGGTAA AGTGGCGGCG TTGTTCTCCC GTGACTTGCT GGGTATCACC AAAGCGTCTC TGGCAACCGA GTCCTTCATC TCTGCTGCCT CGTTCCAGGA GACCACTCGT GTCCTGACCG AAGCTGCTGT TGCGGGCAAA CGTGATGAAC TGCGCGGTCT GAAAGAGAAC GTTATCGTGG GTCGTCTGAT CCCAGCGGGT ACGGGTTATG CGTACCACCA GGATCGTATG CGTCGTCGTG CTGCGGGCGA ACTGCCAGCT GCACCTCAGG TCACTGCGGA AGATGCTTCT GCAAGCCTGG CAGAACTGCT GAACGCAGGT CTGGGCGGCT CAGACAACGA TTAA
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Protein sequence | MKDLLKFLKA QTKTEEFDAI KIALASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP TAHIWFLKSL PSRIGLLLDM PLRDIERVLY FESYVVIEGG MTNLERNQIL TEEQYLDALE EFGDEFDAKM GAEAIQALLK NMDLEQECEQ LRQELNETNS ETKRKKLTKR IKLLEAFVLS GNKPEWMILT VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLAAPDI IVRNEKRMLQ EAVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY LRLHQCGLPK KMALELFKPF IYGKLELRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA RALMMSTNNI LSPANGEPII VPSQDVVLGL YYMTRDCVNA KGEGMVLSGP KEAERIYRAG LASLHARVKV RITEYEKDAN DEFVGKTSII DTTVGRAILW MIVPKGLPYS IVNQALGKKA ISKMLNTCYR ILGLKPTVIF ADQTMYTGFA YAARSGVSVG IDDMVIPAKK TEIISEAEAE VAEIQEQFQS GLVTAGERYN KVIDIWAAAN DRVSKAMMDN LQTETVTNRD GVEEQQVSFN SIYMMADSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR KGLADTALKT ANSGYLTRRL VDVAQDLVVT EDDCGTHEGI LMTPVIEGGD VKEPLRDRVL GRVTAEDIIK PGTADILVTR NTLLDEQWCD LLELNSVDSV KVRSVVGCET DFGVCAHCYG RDLARGHIIN KGEAIGVIAA QSIGEPGTQL TMRTFHIGGA ASRSAAESSI QVKNKGSIKL SNAKSVVNSA GKLVVTSRNT ELKLIDEFGR TKESYKVPYG AVMGKGDGEQ VAGGETVANW DPHTMPVITE VSGFIRFTDM IDGQTITRQT DELTGLSSLV VLDSAERTAG GKDLRPALKI IDANGNDVLI PGTDMPAQYF LPGKAIVQLE DGIQISAGDA LARIPQESSG TKDITGGLPR VADLFEARRP KEPAILAEIT GIISFGKETK GKRRLVITPL DGSEPYEEMI PKWRQLNVFE GERVERGDVV SDGPEAPHDI LRLRGVHAVT RYITNEVQDV YRLQGVKIND KHIEVIVRQM LRKATIDSTG SSDFLEGEQV EYSRVKIANR DLEANGKVAA LFSRDLLGIT KASLATESFI SAASFQETTR VLTEAAVAGK RDELRGLKEN VIVGRLIPAG TGYAYHQDRM RRRAAGELPA APQVTAEDAS ASLAELLNAG LGGSDND
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