Gene Ent638_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_0023 
SymbolemrD 
ID5113030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp24602 
End bp25786 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content59% 
IMG OID640490179 
Productmultidrug resistance protein D 
Protein accessionYP_001174764 
Protein GI146309690 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AACGAAACGT TAATTTACTG TTGATGCTGG TGTTACTGGT GGCTGTCGGT 
CAGATGGCGC AAACCATTTA TATTCCGGCC ATTGCAGACA TGGCAAAGGA TCTCAGCGTG
CGCGAAGGCG CGGTCCAGAG CGTGATGGCT GCCTATCTGC TCACCTATGG CGTATCGCAA
CTCTTTTATG GTCCGCTTTC CGACCGCGTC GGGCGTCGTC CAGTGATCCT GGTTGGGATG
TCGATTTTTA TGCTTGCCAC GGTGATCGCC ATGACGACAC ACAGCCTGCC CCTTCTGATT
GCCGCCAGCG CGCTGCAAGG CATGGGAACC GGCGTGGGCG GCGTGATGGC CCGAACGCTG
CCGCGCGATA TGTATCAAGG CACGCAGCTG CGCCACGCTA ACAGCCTGCT GAACATGGGC
ATTTTGGTCA GTCCGCTGCT GGCTCCGCTG ATTGGCGGCG TGCTGGACAG CATCTGGTCA
TGGCGCGCCT GTTACGCTTT CCTGCTGATA CTGTGCATCA TCGTCACGTT CAGCATGGCG
CGCTGGATGC CCGAGACGCG TCCGACTGGC GCGCCGCGCA CAAAACTTAT CGCCAACTAT
AAAACGCTTT TCGGCAACGG GGCGTTCAGC TGTTATCTGC TGATGTTAAT TGGTGGCCTG
GCGGGCATTG CGGTGTTCGA GGCGTGCTCC GGCGTGCTGT TGGGCGCGGG TTTGGGTCTG
AGCAGCATGG TGGTGAGTAT TCTGTTTATC CTGCCGATTC CGGCGGCATT TTTTGGCGCA
TGGTTCGCCG GTCGCCCGAA TAAGCGCTTT TCGACGCTGA TGTGGCAATC GGTGATCAGC
TGCTTGCTGG CCGGTGTGAT GATGTGGATC CCCGGGTTGT TTGGCGTGAT GACGGTCTGG
ACGCTGCTGA TCCCCGCCGC GCTGTTCTTC TTTGGCGCAG GCATGCTGTT CCCGCTGGCA
ACCAGCGGCG CGATGGAACC ATTTCCCTTC CTCGCTGGCA CCGCGGGCGC GCTGGTGGGC
GGTTTGCAAA ATATCGGTTC CGGCGCACTG GCCTGGCTTT CAGCGATGAT GCCGCAGACC
GGCCAGGCTA GCCTTGGCCT GCTGATGACG CTGATGGGGC TGCTGATTTT ACTTTGCTGG
CTACCGCTGG CGTCACGTGA GCCGCATCAC GAGCAGATGG TTTAA
 
Protein sequence
MKKQRNVNLL LMLVLLVAVG QMAQTIYIPA IADMAKDLSV REGAVQSVMA AYLLTYGVSQ 
LFYGPLSDRV GRRPVILVGM SIFMLATVIA MTTHSLPLLI AASALQGMGT GVGGVMARTL
PRDMYQGTQL RHANSLLNMG ILVSPLLAPL IGGVLDSIWS WRACYAFLLI LCIIVTFSMA
RWMPETRPTG APRTKLIANY KTLFGNGAFS CYLLMLIGGL AGIAVFEACS GVLLGAGLGL
SSMVVSILFI LPIPAAFFGA WFAGRPNKRF STLMWQSVIS CLLAGVMMWI PGLFGVMTVW
TLLIPAALFF FGAGMLFPLA TSGAMEPFPF LAGTAGALVG GLQNIGSGAL AWLSAMMPQT
GQASLGLLMT LMGLLILLCW LPLASREPHH EQMV