| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_4373 |
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| Symbol | |
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| ID | 5086555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009432 |
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| Strand | - |
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| Start bp | 17830 |
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| End bp | 18726 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640485929 |
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| Product | TrbL/VirB6 plasmid conjugal transfer protein |
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| Protein accession | YP_001170523 |
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| Protein GI | 146280368 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 89 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 180 |
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| Fosmid unclonability p-value | 0.803128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGA TGCTCTACGA CAACTTCGTA GCCAGCCTGA CGGACAAGAT GAACACCGTC
AGCAGCGCGA TCTCGGGCGA GCTGACGGCC CCGCTCACGG CGGCCATGAC GCTCTACATC
ATGCTCTATG GCTGGGCGAT CCTGCGCGGC TCGATCCACG AGCCGGTGAT GGATTTCACC
ATCCGGGGCG TGAAGCTCGC GATCATCTGG ACTCTCGTGG CGAACGCCGG CGACTACAGC
TCGTGGGTGG GGGACACGAT CACCAACGGC ATCCCGGCCT TCGTGGAAAC CATCGCGGGC
GGTACCCCCG CATCGCTGCC GTCCGATCCG GTCATGGCCA TGGCCGGCGA GATGAGCATG
GCGGTGCAGG AGGCCTATGG CACGGGGATC GCGGGCAGCA TCTACGGCTA CCTCATGTCG
ATGGTGGTCT GGCTCTCGGC CATTCCCTTC GCGGCCCTAG CCTTCGTGGT GAGCCTTCTC
GTCCACTTCG GCCTGACGCT TCTAGCCTCG ATCGGTCCGC TCTTCATCGG CTTCGCGCTC
TTCGACTTCA GCCGCGGCTG GTTCTTCGCC TGGCTCGGCC AGACGCTGAA CTTCGCGATC
CTGAAGCTGC TGGTCATCGT GCTGATGATC ACGATCACCG CCTTCCTAGG CGACGTCTAT
ACCACCGTTG ACATCGAGGC GGGCGCGGCC GCCGTCGCCG CCTTCCTCGT GGCGCTGGCC
TGCGCCACGC TCTTCTTCTT CCTTCTTCCC TCCATCGCGG CCGCGCTCAG CGCCGGCGTC
GGCGCCTCGA CCGGGGTCGC GCAGCGGTTC GTCGAGCGCA AGATCCTCGG CGGCTTCGGC
GGTGGCGGCT TATCCGGCGG GTCCGCGCGG AGCGGATCGG CCACCCGAAC ATCCTGA
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| Protein sequence | MLQMLYDNFV ASLTDKMNTV SSAISGELTA PLTAAMTLYI MLYGWAILRG SIHEPVMDFT
IRGVKLAIIW TLVANAGDYS SWVGDTITNG IPAFVETIAG GTPASLPSDP VMAMAGEMSM
AVQEAYGTGI AGSIYGYLMS MVVWLSAIPF AALAFVVSLL VHFGLTLLAS IGPLFIGFAL
FDFSRGWFFA WLGQTLNFAI LKLLVIVLMI TITAFLGDVY TTVDIEAGAA AVAAFLVALA
CATLFFFLLP SIAAALSAGV GASTGVAQRF VERKILGGFG GGGLSGGSAR SGSATRTS
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