Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4371 |
Symbol | |
ID | 5086553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009432 |
Strand | - |
Start bp | 16064 |
End bp | 16915 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640485927 |
Product | conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_001170521 |
Protein GI | 146280366 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 91 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 182 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTGA AAGCCGGTCT TCTGGCCTGC CTGCTGGCGG CCACCGCAGG TCCCGCCCTC GCGCTCGACG TGCCGAAACC CTCGAACTCG GACAGCCGCG TCCGCTCGGT CGCCTACAAC GAATGGGATG TGGTGCGCGT CGTCGGCACG ATCCGCACCA GCGTCCAGAT CGTCTTCGGT CAGAGCGAAG AGGTGGTCGA CGTCGCCGGC GGCGACACGG TGTCGTGGGA AGTCGTCCCG CGCGGCAACA TCCTCTACCT CAAGCCGCGG GAAAAGAACC CGCCGACGAA CCTGCAGGTC GCCACGATGC GCCCGGACGG CACGACGCGC ACCTATTCCT TCGAGCTGAT CGTGCGCGAA GGCGAGATCA TGGCGAACTC GCGCGATGTC TATTTCCAGA TCCGCTTCGC CTATCCGCGC GACGAGGCCA CGGCCCGCCG CGAGGCCGCG GCCGAGCAGA AGGCCAGGGC ACGGGAGGAA GCCGCGAAGG CGCGGCTCGC GCATTCGGTC GCGACGGCCG GCGAGAAGAA CTGGATGTAT CTCGCGGCCG GTGCGACCGA CCTGCAGCCC ACCGAGGCCT ATGACAACGG CGAGCAGACG GTGCTGACTT TCGCGCGCCG CACGCGGTTG CCGGCGGTCT ACCTCGTCGA TCGGAACGGC GAGGAGCGCC TAGCCAACAC CACCGTCCGC CGTAACCAGG TCATCGTCCA TGACGTGGCC CCGGAGATCC GGCTGCGCCT CGGGAAGGAG GTCACCGCGA TCTACAACGT CGGCCCCACC TACGACCGCG GCGGAAACAC AGGCACCGGC ACGACGAGCC GAACTGTGAA CCGCGAAATC ATCGGAGGCT GA
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Protein sequence | MMLKAGLLAC LLAATAGPAL ALDVPKPSNS DSRVRSVAYN EWDVVRVVGT IRTSVQIVFG QSEEVVDVAG GDTVSWEVVP RGNILYLKPR EKNPPTNLQV ATMRPDGTTR TYSFELIVRE GEIMANSRDV YFQIRFAYPR DEATARREAA AEQKARAREE AAKARLAHSV ATAGEKNWMY LAAGATDLQP TEAYDNGEQT VLTFARRTRL PAVYLVDRNG EERLANTTVR RNQVIVHDVA PEIRLRLGKE VTAIYNVGPT YDRGGNTGTG TTSRTVNREI IGG
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