Gene Rsph17025_4371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4371 
Symbol 
ID5086553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009432 
Strand
Start bp16064 
End bp16915 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID640485927 
Productconjugal transfer protein TrbG/VirB9/CagX 
Protein accessionYP_001170521 
Protein GI146280366 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones91 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones182 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGA AAGCCGGTCT TCTGGCCTGC CTGCTGGCGG CCACCGCAGG TCCCGCCCTC 
GCGCTCGACG TGCCGAAACC CTCGAACTCG GACAGCCGCG TCCGCTCGGT CGCCTACAAC
GAATGGGATG TGGTGCGCGT CGTCGGCACG ATCCGCACCA GCGTCCAGAT CGTCTTCGGT
CAGAGCGAAG AGGTGGTCGA CGTCGCCGGC GGCGACACGG TGTCGTGGGA AGTCGTCCCG
CGCGGCAACA TCCTCTACCT CAAGCCGCGG GAAAAGAACC CGCCGACGAA CCTGCAGGTC
GCCACGATGC GCCCGGACGG CACGACGCGC ACCTATTCCT TCGAGCTGAT CGTGCGCGAA
GGCGAGATCA TGGCGAACTC GCGCGATGTC TATTTCCAGA TCCGCTTCGC CTATCCGCGC
GACGAGGCCA CGGCCCGCCG CGAGGCCGCG GCCGAGCAGA AGGCCAGGGC ACGGGAGGAA
GCCGCGAAGG CGCGGCTCGC GCATTCGGTC GCGACGGCCG GCGAGAAGAA CTGGATGTAT
CTCGCGGCCG GTGCGACCGA CCTGCAGCCC ACCGAGGCCT ATGACAACGG CGAGCAGACG
GTGCTGACTT TCGCGCGCCG CACGCGGTTG CCGGCGGTCT ACCTCGTCGA TCGGAACGGC
GAGGAGCGCC TAGCCAACAC CACCGTCCGC CGTAACCAGG TCATCGTCCA TGACGTGGCC
CCGGAGATCC GGCTGCGCCT CGGGAAGGAG GTCACCGCGA TCTACAACGT CGGCCCCACC
TACGACCGCG GCGGAAACAC AGGCACCGGC ACGACGAGCC GAACTGTGAA CCGCGAAATC
ATCGGAGGCT GA
 
Protein sequence
MMLKAGLLAC LLAATAGPAL ALDVPKPSNS DSRVRSVAYN EWDVVRVVGT IRTSVQIVFG 
QSEEVVDVAG GDTVSWEVVP RGNILYLKPR EKNPPTNLQV ATMRPDGTTR TYSFELIVRE
GEIMANSRDV YFQIRFAYPR DEATARREAA AEQKARAREE AAKARLAHSV ATAGEKNWMY
LAAGATDLQP TEAYDNGEQT VLTFARRTRL PAVYLVDRNG EERLANTTVR RNQVIVHDVA
PEIRLRLGKE VTAIYNVGPT YDRGGNTGTG TTSRTVNREI IGG