Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4336 |
Symbol | |
ID | 5086512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009431 |
Strand | - |
Start bp | 92755 |
End bp | 93624 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640485892 |
Product | hypothetical protein |
Protein accession | YP_001170486 |
Protein GI | 146280330 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0474832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGCACGA TCATGATTGC CACGGACTTT TCCGAGCGTT CGGACCGCGC CCTGCGCCGC GCGGCGCTTC TGGCCCGCGC CACCGGCGCG CAATTGCACC TTGTTCATGT CGTGGACGAC GACCGCCCCC GCCGCATCGT CGAGCATGAG ACCGGCGACG CTCGGCGGCT GCTGCACGAT CTGGGCCATT CGCTGCGCAG CCATGACGGG ATCGGGTGCA GAACCTCGGT CGTGCTGGCC GACCCGTTCG CCGGCATCAC CCGTGCCGCG TCCGAGGCCG GGGCCGACCT TCTGGTGATC GGCCCGCACC GCCGGCACCT GCTGCGCGAC GCCTTCGCCG GCACGACGGC CGAGCGCGTG ATCCGCACCG CCTCCTGTCC CGTCCTGATG GCGAACGGCC CGCCCGTCGG GCCGTGGCGG CACCTCCTGC TGACCACCGA TCTCTCCGAG GCCTCGCACG CGGCGCTGCG GCGCTTTGCG GATCTGAGGA TCGGCGCGGG CGCGGCCCGG ACGGTGCTGC ATGTCTTCGA CGCGCCGGCC TTGCGGCTTG CGATGGCCGG CACCCTGCCC GAGGACGCGC GCGGCGCCTA TCTCGCCGAT CAGCGCGCCG AGGCGATGGG ACGGCTGACG GGGTTCCTCG CCTCGGCCGG GCTGTCGGAC GCCGATCCGA TCGTGCGGCG CAGCGGCTCG CCCCCGGCGC ACGAGATCCT CGCCGCGGCC GGGGAGGTCG GGGCGGATCT GCTGGTGCTG TCGAGCGTCG GCAAGGGCAG GCTGGCGCGC GCGATCCTGG GCAGCGTGGC GGCGCAGGTC CTGGCCTCGG CCGCGGTCGA TGTGCTGGTG GTGCCTCCGC CGGATCGGGA CGGGCCCTGA
|
Protein sequence | MRTIMIATDF SERSDRALRR AALLARATGA QLHLVHVVDD DRPRRIVEHE TGDARRLLHD LGHSLRSHDG IGCRTSVVLA DPFAGITRAA SEAGADLLVI GPHRRHLLRD AFAGTTAERV IRTASCPVLM ANGPPVGPWR HLLLTTDLSE ASHAALRRFA DLRIGAGAAR TVLHVFDAPA LRLAMAGTLP EDARGAYLAD QRAEAMGRLT GFLASAGLSD ADPIVRRSGS PPAHEILAAA GEVGADLLVL SSVGKGRLAR AILGSVAAQV LASAAVDVLV VPPPDRDGP
|
| |