Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4298 |
Symbol | |
ID | 5086475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009431 |
Strand | + |
Start bp | 56325 |
End bp | 57005 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640485855 |
Product | hypothetical protein |
Protein accession | YP_001170449 |
Protein GI | 146280293 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTTTG TCACCTATCT CCGCGTCTCG ACTGAACGTC AGGGGCAGAG CGGCCTCGGT CTTGAAGCGC AGCGTGCCGC GGCGGCAGCC CATGTCGCGG CGCGCGGTGA GGTGGTGGCC GAGTTCATAG AGATCGAGAG CGGCAAGCGG TCCGACCGGC CCGAGCTTGC GAAGGCACTG GCTGTTGCGA AGAGGGCAGG GGCCGTGCTG CTAATTGCCA AGCTCGATCG CTTGGCCCGC AACGTCGCCT TCATCGCCAA CCTTCTCGAG AGTGGCGTCG AGGTCACGGC AGCCGACATG CCGGAGGCCA GCCGGTTCGT CCTCCACATC ATGGCGGCGG TCGCCGAGCA GGAAGGGAGG GCCATCTCCG AGCGCACCAG GGCGGCGCTC GCCGCAGCAA GGGCGCGGGG TGTGAAGCTC GGCTGGGCAA TGCCAGAGAG AAAAGACGAG CAGCGCAGGG CCTCGACCTC AGGGGCTCTG CAGAACTTCC TCAAGGCTGA CCGCCATGCT GCCAGTGTCC TCCACTTCGT GCGTCAGCAT GCCGGGCAGG GCGCGTCCCT TCGCCAGATA GCTTCAGACC TCAACGCGCA GGGGGTCAGA ACAGCCCGAG GTGGGGCATG GCATGCCGGG ACCGTCCGAA ACATCCTGGC CCGCTCTCCT GACATTGGCT CTTCTGCCTG A
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Protein sequence | MKFVTYLRVS TERQGQSGLG LEAQRAAAAA HVAARGEVVA EFIEIESGKR SDRPELAKAL AVAKRAGAVL LIAKLDRLAR NVAFIANLLE SGVEVTAADM PEASRFVLHI MAAVAEQEGR AISERTRAAL AAARARGVKL GWAMPERKDE QRRASTSGAL QNFLKADRHA ASVLHFVRQH AGQGASLRQI ASDLNAQGVR TARGGAWHAG TVRNILARSP DIGSSA
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