Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4293 |
Symbol | |
ID | 5086470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009431 |
Strand | - |
Start bp | 54226 |
End bp | 54687 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640485850 |
Product | hypothetical protein |
Protein accession | YP_001170444 |
Protein GI | 146280288 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAG AACGAGTCCT GACCCTAGTC AGCCCCGACC GGTTCCTTGA CGCACCGCCG CGGTCCCGCA ACGAGGCGTT GGCATCGCTG ATGCGGCGGA TGCGTCTCTG TGAGGAACAA GGCACCGGCA TCGACAAGGT TCTGACCGCG GTCGAACTCC ATCAGCTTCC GCCGCCCGAT TTCCGCACGG AGGGAGAGGC GGTCAGGGTA GTGTTCTTCG CGCCCCGCCG CTTCGCCGAC ATGACGCCCG AGGAGCGCGT TCGCGCATGC TACCAGCATG CCGCCCTGAA ATACGAGAGT GGCCAGCGGA TGACCAACGC AACCTTGAGG GACCGTCTGG GGATAGATCC TCGCAACGCC TCGCAGGCCT CTGTCATCAT CCGGCTTGCG GTGGGATCCG ATCTCATCCG GCAAGCAGAT CCGGAGCATC CTCGCGCAGG TTATGTCCCC TTCTGGGCTT GA
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Protein sequence | MKRERVLTLV SPDRFLDAPP RSRNEALASL MRRMRLCEEQ GTGIDKVLTA VELHQLPPPD FRTEGEAVRV VFFAPRRFAD MTPEERVRAC YQHAALKYES GQRMTNATLR DRLGIDPRNA SQASVIIRLA VGSDLIRQAD PEHPRAGYVP FWA
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