Gene Rsph17025_4293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4293 
Symbol 
ID5086470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009431 
Strand
Start bp54226 
End bp54687 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID640485850 
Producthypothetical protein 
Protein accessionYP_001170444 
Protein GI146280288 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG AACGAGTCCT GACCCTAGTC AGCCCCGACC GGTTCCTTGA CGCACCGCCG 
CGGTCCCGCA ACGAGGCGTT GGCATCGCTG ATGCGGCGGA TGCGTCTCTG TGAGGAACAA
GGCACCGGCA TCGACAAGGT TCTGACCGCG GTCGAACTCC ATCAGCTTCC GCCGCCCGAT
TTCCGCACGG AGGGAGAGGC GGTCAGGGTA GTGTTCTTCG CGCCCCGCCG CTTCGCCGAC
ATGACGCCCG AGGAGCGCGT TCGCGCATGC TACCAGCATG CCGCCCTGAA ATACGAGAGT
GGCCAGCGGA TGACCAACGC AACCTTGAGG GACCGTCTGG GGATAGATCC TCGCAACGCC
TCGCAGGCCT CTGTCATCAT CCGGCTTGCG GTGGGATCCG ATCTCATCCG GCAAGCAGAT
CCGGAGCATC CTCGCGCAGG TTATGTCCCC TTCTGGGCTT GA
 
Protein sequence
MKRERVLTLV SPDRFLDAPP RSRNEALASL MRRMRLCEEQ GTGIDKVLTA VELHQLPPPD 
FRTEGEAVRV VFFAPRRFAD MTPEERVRAC YQHAALKYES GQRMTNATLR DRLGIDPRNA
SQASVIIRLA VGSDLIRQAD PEHPRAGYVP FWA