Gene Rsph17025_4282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4282 
Symbol 
ID5086460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009431 
Strand
Start bp44882 
End bp46186 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content70% 
IMG OID640485840 
Producthypothetical protein 
Protein accessionYP_001170434 
Protein GI146280278 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.789831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTTG AAATCGCGAT CGTGGTCCTT CTGACCCTGA TCAACGGCCT TCTGGCCATG 
TCCGAGCTTG CCATCGTCTC GGCGCGTCCC GGGCGGCTCA AGGTTCTCGC CGACCAGGGG
ACCCCGGGCG CGGCCACCGC CATCCGTCTG GCCGAGGATC CGGGCCGGTT TCTGTCCAGC
GTGCAGATCG GCATCACCCT TGTGGGTGTC CTGTCCGGCG CCTTCTCCGG CGCAACGCTC
GGTGCCCGGC TTGCCGGGGC GCTGGCAACC GCGGGAATGC CCGCCGCCCT CGCCCAGTCG
GTGGGCGTCG GCGCCGTGGT GGTGGCCATC ACCTACCTGT CGCTGATCGT GGGCGAACTG
GTGCCCAAGC AGATCGCGCT GCGGTCGCCG GAGCAGGTGG CCTGCCGCGT GGCGCCGCTG
ATGCGGGCCG TGGCGGCCGT CGCCGCGCCC CTGGTCTGGC TGCTCGACCG GTCGGGCAAG
GCGGTGCTGG CGCTGCTGGG GCAGGGCGGC GCGCGCACGC AGGCCGTGAC CGACGAAGAG
GTCCGGCTTC TGATCTCGGA GGCCGAGGCC TCGGGCTCGA TCCACGCGGC CGAGAGCCGG
ATGATCTCGG GTGTGATGCG CATGGCCGAC CGGACCGCCC GCGGCCTGAT GACGCCGCGC
CATGAGGTGG AGGTGCTGAA CGCAGGCGCC ACCCGTGCCG AGGCCATGGC GCTGTTCAAC
GGCTCGCGCC GCTCGCGCCT TCCGGTCCGC GCCGGCGGCC CGGATGACAT CATCGGCGTG
GTCTCGATCC GCGATGTGGC CGCCGCGCCC GCGAGCGACG GGTTTGACCT GCGTGACCTC
GTGCAGGAGG CGCCGGTGGT CCACGAACAC CAGGGCGCGC TGGAAGTGAT CGAGCGGTTG
CGCGCGACAC CGTCGCACAT GGTTCTGGTC TATGATGAAT ACGGCGCGTT CGAGGGTATC
GTGACACCGC TCGACCTGCT GGAGATCATC ACCGGCGCCT TCAACGAGGA AACCACCGAT
GAGCCGGTCG TGGTCACTCG GGAGGATGGG TCGATGCTGG TAGCGGGTTG GATGCCGGCG
GATGAATTTG CGGATCTGTT GTCGTTGCGG CTGCCGGAAG GCCGGGAGTA CGACACGGCC
GCCGGCCTGG TGCTGGAGGC GCTGGCCCGT ATTCCCGCGG TCGGAGACAT CTTCCATCTG
CAGGGCTGGC GGATCGAGGT TGTCGACCTC GACGGACGCC GCATCGACAA GCTGCTGGTG
TCCAGGGACC GGCCGGTCGT GCGCCACCGG CAGAGCGATC GCTGA
 
Protein sequence
MYLEIAIVVL LTLINGLLAM SELAIVSARP GRLKVLADQG TPGAATAIRL AEDPGRFLSS 
VQIGITLVGV LSGAFSGATL GARLAGALAT AGMPAALAQS VGVGAVVVAI TYLSLIVGEL
VPKQIALRSP EQVACRVAPL MRAVAAVAAP LVWLLDRSGK AVLALLGQGG ARTQAVTDEE
VRLLISEAEA SGSIHAAESR MISGVMRMAD RTARGLMTPR HEVEVLNAGA TRAEAMALFN
GSRRSRLPVR AGGPDDIIGV VSIRDVAAAP ASDGFDLRDL VQEAPVVHEH QGALEVIERL
RATPSHMVLV YDEYGAFEGI VTPLDLLEII TGAFNEETTD EPVVVTREDG SMLVAGWMPA
DEFADLLSLR LPEGREYDTA AGLVLEALAR IPAVGDIFHL QGWRIEVVDL DGRRIDKLLV
SRDRPVVRHR QSDR