Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4282 |
Symbol | |
ID | 5086460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009431 |
Strand | - |
Start bp | 44882 |
End bp | 46186 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640485840 |
Product | hypothetical protein |
Protein accession | YP_001170434 |
Protein GI | 146280278 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.789831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCTTG AAATCGCGAT CGTGGTCCTT CTGACCCTGA TCAACGGCCT TCTGGCCATG TCCGAGCTTG CCATCGTCTC GGCGCGTCCC GGGCGGCTCA AGGTTCTCGC CGACCAGGGG ACCCCGGGCG CGGCCACCGC CATCCGTCTG GCCGAGGATC CGGGCCGGTT TCTGTCCAGC GTGCAGATCG GCATCACCCT TGTGGGTGTC CTGTCCGGCG CCTTCTCCGG CGCAACGCTC GGTGCCCGGC TTGCCGGGGC GCTGGCAACC GCGGGAATGC CCGCCGCCCT CGCCCAGTCG GTGGGCGTCG GCGCCGTGGT GGTGGCCATC ACCTACCTGT CGCTGATCGT GGGCGAACTG GTGCCCAAGC AGATCGCGCT GCGGTCGCCG GAGCAGGTGG CCTGCCGCGT GGCGCCGCTG ATGCGGGCCG TGGCGGCCGT CGCCGCGCCC CTGGTCTGGC TGCTCGACCG GTCGGGCAAG GCGGTGCTGG CGCTGCTGGG GCAGGGCGGC GCGCGCACGC AGGCCGTGAC CGACGAAGAG GTCCGGCTTC TGATCTCGGA GGCCGAGGCC TCGGGCTCGA TCCACGCGGC CGAGAGCCGG ATGATCTCGG GTGTGATGCG CATGGCCGAC CGGACCGCCC GCGGCCTGAT GACGCCGCGC CATGAGGTGG AGGTGCTGAA CGCAGGCGCC ACCCGTGCCG AGGCCATGGC GCTGTTCAAC GGCTCGCGCC GCTCGCGCCT TCCGGTCCGC GCCGGCGGCC CGGATGACAT CATCGGCGTG GTCTCGATCC GCGATGTGGC CGCCGCGCCC GCGAGCGACG GGTTTGACCT GCGTGACCTC GTGCAGGAGG CGCCGGTGGT CCACGAACAC CAGGGCGCGC TGGAAGTGAT CGAGCGGTTG CGCGCGACAC CGTCGCACAT GGTTCTGGTC TATGATGAAT ACGGCGCGTT CGAGGGTATC GTGACACCGC TCGACCTGCT GGAGATCATC ACCGGCGCCT TCAACGAGGA AACCACCGAT GAGCCGGTCG TGGTCACTCG GGAGGATGGG TCGATGCTGG TAGCGGGTTG GATGCCGGCG GATGAATTTG CGGATCTGTT GTCGTTGCGG CTGCCGGAAG GCCGGGAGTA CGACACGGCC GCCGGCCTGG TGCTGGAGGC GCTGGCCCGT ATTCCCGCGG TCGGAGACAT CTTCCATCTG CAGGGCTGGC GGATCGAGGT TGTCGACCTC GACGGACGCC GCATCGACAA GCTGCTGGTG TCCAGGGACC GGCCGGTCGT GCGCCACCGG CAGAGCGATC GCTGA
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Protein sequence | MYLEIAIVVL LTLINGLLAM SELAIVSARP GRLKVLADQG TPGAATAIRL AEDPGRFLSS VQIGITLVGV LSGAFSGATL GARLAGALAT AGMPAALAQS VGVGAVVVAI TYLSLIVGEL VPKQIALRSP EQVACRVAPL MRAVAAVAAP LVWLLDRSGK AVLALLGQGG ARTQAVTDEE VRLLISEAEA SGSIHAAESR MISGVMRMAD RTARGLMTPR HEVEVLNAGA TRAEAMALFN GSRRSRLPVR AGGPDDIIGV VSIRDVAAAP ASDGFDLRDL VQEAPVVHEH QGALEVIERL RATPSHMVLV YDEYGAFEGI VTPLDLLEII TGAFNEETTD EPVVVTREDG SMLVAGWMPA DEFADLLSLR LPEGREYDTA AGLVLEALAR IPAVGDIFHL QGWRIEVVDL DGRRIDKLLV SRDRPVVRHR QSDR
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