Gene Rsph17025_4274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4274 
Symbol 
ID5086452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009431 
Strand
Start bp33049 
End bp34155 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content72% 
IMG OID640485832 
Producthypothetical protein 
Protein accessionYP_001170426 
Protein GI146280270 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGCG GCCATTCCCC GGGCCGCCGC CGGACGCTGT CCCTCCTGCC GGGTCGGGTT 
CGCCCCGGCG GGGGTCGGCT CAAGGTCACC CTCTCAGGGG GGGCCGATGT CCCACATCGG
CCGCCCTGCC GGGAACGGCG CAGCCGCGCC CCGTCCGCCC GGGAGGCGGC CGTGATCAGG
CTGCGCCCCT TGATCGCGCC CGCGCTTCTG CTGCTCGGCA TCGCCGGCAT GACCTTCGCG
CAAGCCGAGG TGAGCCGGCG CTTCGACATG GCTCCGCTTG GCCGGAACGG GCAGAACGCG
CTGCAGATGG CGGCCTATCT GGGCGTCGCC TGGCTTCTCA GCCGGATCCT GGGTCAGTTG
CTGGCCCGGC TGAGGCCGCA CAGCCGGCCG GTGCCGAAGC TGCTCGGCGA TCTCGTCTCG
GCCCTTCTGT TCCTGACGGC GATCGTCTCG GGGGTGCTGC TCATCCTGGG CCACGGCGCC
GGCAGCGCGC TGGCGGGGTC GGGGGTCATG CTGGCCCTGT TCGGCTTCGC GATCCGCAAC
GTGGTGGCCG ATACGCTCTC GGGGATCGCC CTGGGGCTGG AGGCGCCGTT CCGCATCGGG
GACTGGGTTG ATATCGAGGG GCTGGGCAAG GGCCGGGTGG TCGAGATCGG CTGGCGCACC
ACGCGGCTTC TGACGCGCGA CTCGACCTAT GTGATCCTGC CCAACAGCCA GGTCTCGCGT
CAGCGCATCG TCAACTACAG CGCGCCCCGG TCCGAATTCC GGGCGCAGAT GGAGATCAAG
CTGGGACATG CCACTCCGGC GGCCGAAGGG GCGGAGCTTT TGCACAAGGC CCTGCGCGAC
GCGCCGCTGA TCCGCCAGTC GCCCGCGCCC GACGTGCGCA TCCAGGCCAT CGAGCCCGAT
GGGGTGCGGT ATGCGCTGCG CTACTGGCTC GGTCGGTTCG ATCACGAATG GGATTGCCGC
GATGCGATAT GGCGTGAGGT GGATGCGGCG CTGCGCCGGG CCGGGATCTC GCTGCCGCAG
CCCCCGGTCG CCATGCTCTA CGCCCGTGAG GGAGGCGCGG TGCCAGGGGC GGGGATGCCG
GCCAGCGTCC CCGTCGCCAT GCGCTGA
 
Protein sequence
MRRGHSPGRR RTLSLLPGRV RPGGGRLKVT LSGGADVPHR PPCRERRSRA PSAREAAVIR 
LRPLIAPALL LLGIAGMTFA QAEVSRRFDM APLGRNGQNA LQMAAYLGVA WLLSRILGQL
LARLRPHSRP VPKLLGDLVS ALLFLTAIVS GVLLILGHGA GSALAGSGVM LALFGFAIRN
VVADTLSGIA LGLEAPFRIG DWVDIEGLGK GRVVEIGWRT TRLLTRDSTY VILPNSQVSR
QRIVNYSAPR SEFRAQMEIK LGHATPAAEG AELLHKALRD APLIRQSPAP DVRIQAIEPD
GVRYALRYWL GRFDHEWDCR DAIWREVDAA LRRAGISLPQ PPVAMLYARE GGAVPGAGMP
ASVPVAMR