Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4264 |
Symbol | |
ID | 5086442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009431 |
Strand | + |
Start bp | 20413 |
End bp | 21294 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640485822 |
Product | transport system permease protein |
Protein accession | YP_001170416 |
Protein GI | 146280260 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4607] ABC-type enterochelin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTC TTGCGTCCGG CCTGCTGGCC GGGCTTCTTC TGGCGGCACC CGCAAGCGCC GCGACCGTCG AAACCGCCCT CAGGCCGGTC ACCGTCGGAC AGGTGCCCGA GAGGGTCGCG GTCTTCGACA TCGCCGCGCT CGACACGCTG ACAGCCCTTG GCGTTCGCGT GGATGGCGCG CCGGTGCAGA CCTTTGTGCC GGGGCTGGCC GATCTGGATG CGGCGCCCGT CGGCACGATC TTCGAGCCGG ATCTCGAGGC GCTGTCTGCG CTGGCGCCCG ATCTTGTGAT CGCGGGGGGC CGCTCGTCGC CGCAGGTGAA GGCCCTGTCG CAGGTGGCGC CCACGCTCGA CATGACCATC GGGCCGGACC TCATCGGCGA TGCGCGGCAG CGGCTTGCGG CCTACGGCAC CCTGTTCGGG CTGGAAGCCG AGGCCGAGCG GCTCGACGCC GCGCTGGGGG CGAAGCTCGA CGAGCTTGCC GCCGCGGCCG AGGGCAAGGG GAGCCTTCTG ATCCTGCTGA CCAACGGGCC GAAGATGTCG GCGTTCGGGC GCGGATCGCG CTTTGGCTGG CTGCACGAGG CGACCGGCAT GCCCGAGGCG GTGCCGGAAC TGGAGGCGGC GACCCATGGC GACGCCGTGT CGTTCGAGTT CATCGCGCGG ACAAACCCGG ACTGGCTTTT CGTCATCGAC CGGGGCGCGG CCATCGGCGC CGAAGGCGCC TCGGCGCGGG CCGTGCTCGA CAATCCGCTG GTGCGGGACA CGACCGCCTG GACATCCGGT CAGGTGGTCT ATCTCGATCC GGCCGAAGTC TATGTCGCGG GCGGCGGCTA CCGCTCGCTC ATGGGCACGC TCGAGGATCT CGTCACAGCC CTCGACCGAT GA
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Protein sequence | MIRLASGLLA GLLLAAPASA ATVETALRPV TVGQVPERVA VFDIAALDTL TALGVRVDGA PVQTFVPGLA DLDAAPVGTI FEPDLEALSA LAPDLVIAGG RSSPQVKALS QVAPTLDMTI GPDLIGDARQ RLAAYGTLFG LEAEAERLDA ALGAKLDELA AAAEGKGSLL ILLTNGPKMS AFGRGSRFGW LHEATGMPEA VPELEAATHG DAVSFEFIAR TNPDWLFVID RGAAIGAEGA SARAVLDNPL VRDTTAWTSG QVVYLDPAEV YVAGGGYRSL MGTLEDLVTA LDR
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