Gene Rsph17025_4264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4264 
Symbol 
ID5086442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009431 
Strand
Start bp20413 
End bp21294 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content71% 
IMG OID640485822 
Producttransport system permease protein 
Protein accessionYP_001170416 
Protein GI146280260 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4607] ABC-type enterochelin transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTC TTGCGTCCGG CCTGCTGGCC GGGCTTCTTC TGGCGGCACC CGCAAGCGCC 
GCGACCGTCG AAACCGCCCT CAGGCCGGTC ACCGTCGGAC AGGTGCCCGA GAGGGTCGCG
GTCTTCGACA TCGCCGCGCT CGACACGCTG ACAGCCCTTG GCGTTCGCGT GGATGGCGCG
CCGGTGCAGA CCTTTGTGCC GGGGCTGGCC GATCTGGATG CGGCGCCCGT CGGCACGATC
TTCGAGCCGG ATCTCGAGGC GCTGTCTGCG CTGGCGCCCG ATCTTGTGAT CGCGGGGGGC
CGCTCGTCGC CGCAGGTGAA GGCCCTGTCG CAGGTGGCGC CCACGCTCGA CATGACCATC
GGGCCGGACC TCATCGGCGA TGCGCGGCAG CGGCTTGCGG CCTACGGCAC CCTGTTCGGG
CTGGAAGCCG AGGCCGAGCG GCTCGACGCC GCGCTGGGGG CGAAGCTCGA CGAGCTTGCC
GCCGCGGCCG AGGGCAAGGG GAGCCTTCTG ATCCTGCTGA CCAACGGGCC GAAGATGTCG
GCGTTCGGGC GCGGATCGCG CTTTGGCTGG CTGCACGAGG CGACCGGCAT GCCCGAGGCG
GTGCCGGAAC TGGAGGCGGC GACCCATGGC GACGCCGTGT CGTTCGAGTT CATCGCGCGG
ACAAACCCGG ACTGGCTTTT CGTCATCGAC CGGGGCGCGG CCATCGGCGC CGAAGGCGCC
TCGGCGCGGG CCGTGCTCGA CAATCCGCTG GTGCGGGACA CGACCGCCTG GACATCCGGT
CAGGTGGTCT ATCTCGATCC GGCCGAAGTC TATGTCGCGG GCGGCGGCTA CCGCTCGCTC
ATGGGCACGC TCGAGGATCT CGTCACAGCC CTCGACCGAT GA
 
Protein sequence
MIRLASGLLA GLLLAAPASA ATVETALRPV TVGQVPERVA VFDIAALDTL TALGVRVDGA 
PVQTFVPGLA DLDAAPVGTI FEPDLEALSA LAPDLVIAGG RSSPQVKALS QVAPTLDMTI
GPDLIGDARQ RLAAYGTLFG LEAEAERLDA ALGAKLDELA AAAEGKGSLL ILLTNGPKMS
AFGRGSRFGW LHEATGMPEA VPELEAATHG DAVSFEFIAR TNPDWLFVID RGAAIGAEGA
SARAVLDNPL VRDTTAWTSG QVVYLDPAEV YVAGGGYRSL MGTLEDLVTA LDR