| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_4255 |
|---|
| Symbol | |
|---|
| ID | 5086435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009431 |
|---|
| Strand | + |
|---|
| Start bp | 14699 |
|---|
| End bp | 15466 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640485815 |
|---|
| Product | 7-alpha-hydroxysteroid dehydrogenase |
|---|
| Protein accession | YP_001170409 |
|---|
| Protein GI | 146280253 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.337254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.605714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACC CAGGTCTTTT CAGGCTGGAT GGGCAGATTG CGCTGGTGAC GGGCGCCGGA
GCCGGCATCG GCCGCGGCAT CGCCGAGATG TTCGCCGGCG CGGGCGCCTC GGTCGTGGTC
AGCGATCTCA GGCAGGACAC GGCCGGATCG GTCGCCACGG CGATCAGCGA CGCCGGCGGC
CAGGCGGTCG GGATCGCCTG CAACGTCACG CGCGAAGTGG ATCTGGAGGC CGCGGTCCAG
GCGGCGGTCG ATCGGTTCGG CGGGCTCACG ATCCTGGTCA ACAACGCCGG GGGTGGCGGG
CCGAAACCCT TCGACATGCC GATGGAGGAG TTCCGCTGGG CCTACGAGCT CAACGTCTTC
GCCCCGTTCC GGCTGACACA GCTGGCCGTG CCGCACATGG AGGCCGCGGG CGGCGGTGCG
GTGCTGAACA TCTCGTCCAT GTCGGGAGAG AACAGGAATC AGCGCATGGC CTCCTACGGG
TCATCGAAGG CGGCGATCAG CCACCTGACC CGCAACATCG CCTTCGATCT CGGGCCGAAG
AACATCCGCG TCAACGCCAT CGCGCCGGGC GCGATCCGCA CCGACGCGCT GGCCACCGTG
CTCACGCCCG AGGTCGAGGC GGCGATGCTG AAGCACACGC CCCTCAAGCG GCTGGGCGTG
CCCGCCGACA TCGCCGCGGC CGCTCTCTAC CTCTGCTCGC CCGCGGCGGC CTGGGTGAGC
GGGCAGATCC TGACCGTCTC GGGCGGCGGC GTGCAGGAAC TCGACTGA
|
|---|
| Protein sequence | MFDPGLFRLD GQIALVTGAG AGIGRGIAEM FAGAGASVVV SDLRQDTAGS VATAISDAGG
QAVGIACNVT REVDLEAAVQ AAVDRFGGLT ILVNNAGGGG PKPFDMPMEE FRWAYELNVF
APFRLTQLAV PHMEAAGGGA VLNISSMSGE NRNQRMASYG SSKAAISHLT RNIAFDLGPK
NIRVNAIAPG AIRTDALATV LTPEVEAAML KHTPLKRLGV PADIAAAALY LCSPAAAWVS
GQILTVSGGG VQELD
|
|---|
| |