Gene Rsph17025_4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4228 
Symbol 
ID5086399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp270212 
End bp270892 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID640485789 
Producthypothetical protein 
Protein accessionYP_001170383 
Protein GI146280226 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.988743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTTC TCCGCGATCT GAGGGCCGGC GCGCGGGCCG CCCTGCCCAT CGCGCCGGCC 
TACCTGCCGG TGGCCTTCGC CCTTGGTGCG GCCTCGTCCC GGCTGGGATT CTCGGCGGCC
GAAAGCGCCT TGTGGTCCTT CACGATGTTC TCGGGCGCCA ACCAGGCGCT CATGCTGAGT
TCGCTTTCCT CCGGGGTGCC GCTGCTGGTC ATCGCGGCCC TGTGCATAGC TGCGAGCCTC
CGGCACCTGC TTTACGGACT CGCCCTTGCC CCGCGGATTT CGGCCAGCCC GATCCAGCGC
TCGGTCTTCG GCTACGGGCT GACCGATGAG GTCTTCGCCA CCGCCCTGAC GGCCGGCGAG
GGACAGAGCA GGCCTCTGCG CGGCCCCTGG CTGATCGCGC TGGGGCTGAC GGTGCTTCTG
GTCTGGGTGG CCGGGACCGG GATGGGGAAT GCCGCCGGAG ATGCCCTTCA GGCCGTGTCG
CCGCATCTGG CCAGCACCCT CGACTTCGCC CTCCCCGCCC TGTTCCTGGC GCTGGTTCTG
GCGATGGCAC GGCGATCCCT CCATCTGCCG ATGCTTCTTG CGGCCAGCAT CGCCGCCCTT
CTTCTCGGGC TGGGCCGGCC GGAACTCGCC GTGCCCCTGG CGGCGCTGGC CGCCCTTCTC
CCACGGCGGC GGACGGCATG A
 
Protein sequence
MTVLRDLRAG ARAALPIAPA YLPVAFALGA ASSRLGFSAA ESALWSFTMF SGANQALMLS 
SLSSGVPLLV IAALCIAASL RHLLYGLALA PRISASPIQR SVFGYGLTDE VFATALTAGE
GQSRPLRGPW LIALGLTVLL VWVAGTGMGN AAGDALQAVS PHLASTLDFA LPALFLALVL
AMARRSLHLP MLLAASIAAL LLGLGRPELA VPLAALAALL PRRRTA