Gene Rsph17025_4190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4190 
Symbol 
ID5086361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp235160 
End bp236047 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID640485751 
Producthypothetical protein 
Protein accessionYP_001170345 
Protein GI146280188 
COG category[R] General function prediction only 
COG ID[COG3550] Uncharacterized protein related to capsule biosynthesis enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.196944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCTCA TCACCTACCG TCCCGAGGAG CGAACGGTCG ACCTGGCCGG CATCGACCTT 
GAATGGTTTG CCGATCTCGC AACCAGCATG GCCGAGGACG CCTCGGTAGA GGATCTTGGC
AGGGCCCGCG CGGCGGCCGG CGGCTCTGCC GGTGCCCGGC CGAAGTTCGT GGCCCTGCTC
GATGTGGAGA CTGGCCGAGT GCGCGACCAT CGGCACACCC CGGAGCGGGG CGAACGGCAG
GTGTTGATCA AGCATCGGGC GGCGGCCGAC AGCCCGACCG CGATAGAGGA GGAGGAGGCT
TATGCGCGGA TGGCGCGGGC GGCTGGCATC GCCATGCCCT GGAGCATGGT GCTGCGCTCC
AGGCGCGGCG ACCCCTTCCT TGCCGTCGAG CGCTTCGACC GCCGCGGCGC CGGACGGGTG
CATATGCACA CCGCCGCCGG CCTGCTCGAC GTCGACTTCC GCCAGCCGTC CATCGACTAC
GCAAACCTGC TGAAGCTGGT GCGCTGGACC ACCCGGCACG CTGGAGATCA GGACGAAATG
TTCCGCAGGA TGACCTTCAA CGTCCTCACC CACAACCGGG ATGATCACCT GAAGAACCAC
GCCTTCCTGA TGGACCCCCG AGGCAGCTGG CGCTTGTCGC CGGCCTACGA CATCAGCTTT
TCCGACGGTC CCGGCGGCGA GCACCATCTC GCCATCGCTG GAGAGGGGCG TCGACCTGGC
CGGAAGCATG TGGACGAGGT CGGGCGGGCG CTCGGGATGA AACCCGCAGC GATCGCGGCG
CTCGTTGATC CGATTTGCGC CGCCGTTGCC GACTGGCCGC GACACGCAGA TGCGGCAGGA
GTTCCGTCGC GGCGCGCCAA GCAGATCGCA GGCTACTTCG CCATATAA
 
Protein sequence
MSLITYRPEE RTVDLAGIDL EWFADLATSM AEDASVEDLG RARAAAGGSA GARPKFVALL 
DVETGRVRDH RHTPERGERQ VLIKHRAAAD SPTAIEEEEA YARMARAAGI AMPWSMVLRS
RRGDPFLAVE RFDRRGAGRV HMHTAAGLLD VDFRQPSIDY ANLLKLVRWT TRHAGDQDEM
FRRMTFNVLT HNRDDHLKNH AFLMDPRGSW RLSPAYDISF SDGPGGEHHL AIAGEGRRPG
RKHVDEVGRA LGMKPAAIAA LVDPICAAVA DWPRHADAAG VPSRRAKQIA GYFAI