Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4177 |
Symbol | |
ID | 5086349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | + |
Start bp | 221565 |
End bp | 222599 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640485739 |
Product | hypothetical protein |
Protein accession | YP_001170333 |
Protein GI | 146280176 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2203] FOG: GAF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.878015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCGC CCATGACATG CCGGCCGGGC ATAGCCGGCA ACGGTGAGGC CCGGCGGATC GCCGCCTTGC GGCAATACCA CATCCTCGAC ACACTCCCCG ACCGGGAATT CGACATCATT ACCCGGACCG TGCAGCATGT GTTCAACGTG CCCATGACGG CGATCACCTT CATCGACTCA TACCGGCAGT GGTTCAAATC CGAGATCGGC ATGGACAGGC GCGAGACCGA CCGTGCCAGC AGCTTCTGCA ACCGGACGAT CGAGGGCTCC GGTCCGATGG CCGTCGCCGA TGCGCTCGAG GATCCGCGCT TCTCCTCGAG CCCGCTGGTC TGCGGCCCTC CCCATATCCG CGCCTACCTC GGCGCCCCGC TGCCGACACC GGAGGGCCAC AATATCGGGG TCCTGTGCAT CATGGACCAT GCACCGCGCG CCTTCAGCAG CCGTGACGGC GCCCTGCTCA CCCATTTCGC CCAGCTGGTC ATGGAGCGGC TGGAATTGCG CCGGAGCATT TCGGAGGACA TGCTGACCGG GGCCTGCATG CGGCGGGCCT TCGAGGAACA GTTCGCCGCG GCCCTGCACC GCCGGCAGGG ATCGGGAGAC GAGCTGACGC TCGTTCTGTT CGATATCGAC GAGTTCAAGG CCTTCAACGA CACCTACGGC CATCCCGTCG GTGACCGGAT CCTCAGGGCC GTGGGGCGCT GCACCCGCAG CATGATCCGG CCGGGAGACA TTTTCGGCCG CATCGGAGGG GACGAGTTCG CCATCGTCCT GAATGGAACA CCCCTGGCCA CCGCCGAACG CCGCGTGGAG CGCCTGCGCC GGCGCTTTGC CGCGATCCGC CTGGCGGAGG CACCCGATGC CGCCGTGACC GCCAGTTTCG GCCTGGCCGG CGCCCCGGCC GGTGCAACGG CCCAGGAGCT GATGAAGATC GCCGATGCCG CGCTCTATGC CGCGAAGGGC CGGGGCAAGA ACGCGGTCCA CATGAGCACG GGCCTCTTGC CCGGGGGTCC CGGTCAGGGT GAGATGCCGG ACTGA
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Protein sequence | MPPPMTCRPG IAGNGEARRI AALRQYHILD TLPDREFDII TRTVQHVFNV PMTAITFIDS YRQWFKSEIG MDRRETDRAS SFCNRTIEGS GPMAVADALE DPRFSSSPLV CGPPHIRAYL GAPLPTPEGH NIGVLCIMDH APRAFSSRDG ALLTHFAQLV MERLELRRSI SEDMLTGACM RRAFEEQFAA ALHRRQGSGD ELTLVLFDID EFKAFNDTYG HPVGDRILRA VGRCTRSMIR PGDIFGRIGG DEFAIVLNGT PLATAERRVE RLRRRFAAIR LAEAPDAAVT ASFGLAGAPA GATAQELMKI ADAALYAAKG RGKNAVHMST GLLPGGPGQG EMPD
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