Gene Rsph17025_4098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4098 
Symbol 
ID5086271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp150419 
End bp151813 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content68% 
IMG OID640485661 
Producthypothetical protein 
Protein accessionYP_001170255 
Protein GI146280098 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.197765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.22433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CGATGATCGG CACGGGCTAT GTGGGTCTCG TCTCCGGGGT CTGTTTCTCG 
GACTTCGGCC ATGAGGTCGT CTGCGTCGAC AAGGACGTAT CGAAGATCGC CAGGCTGAAG
GACGGCAAGG TGCCGATCTT CGAGCCCGGG CTCGAGGCGC TGATGGCGCG CAACGTGGCG
GCGGGGCGGC TCACCTTCAC GCTCGATCTG GCCGAGGCGA TGCGCGGGGC CGAGGCGGTC
TTCATCGCCG TGGGCACGCC GACGCGGCGG GGCGACGGGC ATGCCGACCT CACCCATGTC
ATGGCCGCGG CCGAGGAGAT CGCCCGCACG CTCGAGCATT ACGCGGTGGT CGTGACCAAA
TCGACCGTGC CGATCGGCAC CAACCGCAAG GTGGCCGAGG TGATCCGCAC GGCCAATCCG
GCCGCCGATG TCGACGTGGC CTCGAACCCC GAATTCCTGC GCGAAGGGGC CGCCATCGAC
GATTTCATGC GCCCCGACCG CGTGGTGGTG GGGGTGGAGT CCGAGCGCGC CCGGAAGATC
ATGGCCGACA TCTACCGCCC GCTGTTCCTG CGCGACTTTC CGGTGGTCTT TACCGGCCTC
GAGAGCGCCG AGATGATCAA ATACGCCGCG AACGCCTTCC TCGCGACCAA GATCACCTTC
ATCAACGAGA TCGCGGCGCT CTGCGAGCGG GTGGGGGCCG ACATCAAGGC GGTCTCGAAG
GGGATGGGCC TCGACGGGCG GATCGGCAAC AAGTTCCTCC ATGCCGGGCC GGGCTATGGC
GGCTCGTGCT TTCCCAAGGA CACCAGGGCG CTCGCCCGGA TGGGGCAGGA GCATGCCACG
CCCATCCAGA TCGTCGAGAC CGTCATCAAG GTCAATGACG AGATCAAGCG CCGGATGATC
GAGAAGATCG AGGATCTCTG CGAGGGCTCG TGCCGTGACA AGGTGATCAC GGTGCTGGGG
GTGACCTTCA AGCCCAACAC CGACGACATG CGCGACGCGC CCTCGCTGAC CATCGTCCCG
GCCCTGATCG GCGCGGGGGC GAAGGTGCGG GTGGTCGATC CCGAGGGGCG GCGCGAGGGA
GAGCATCTCC TGCCGGGCGT GCGCTGGATG GACGATGCCT ATGCGGCGGC CGAGGGTGCC
TCGGCGCTGG TGATCCTGAC CGAGTGGAAC GAGTTCCGGG CCCTCGATCT GGGCCGGCTG
GCGGGGTTGA TGGCCGTGCC TCGGCTCGCG GATCTGCGCA ATGTCTACGA GCCGGAGGCG
GTGCGCGCGG CGGGCTTCAT GGCCTGTCAG GCGGTCGGCC GGAGGCTGGA CGGGCTGCCG
GGTCGGGGCC CGGACCAGGA AACGGATCGT GCTGCGGCGC ACGCCTCCGG GGAGCATGCG
CGGAAGACGG CCTGA
 
Protein sequence
MKIAMIGTGY VGLVSGVCFS DFGHEVVCVD KDVSKIARLK DGKVPIFEPG LEALMARNVA 
AGRLTFTLDL AEAMRGAEAV FIAVGTPTRR GDGHADLTHV MAAAEEIART LEHYAVVVTK
STVPIGTNRK VAEVIRTANP AADVDVASNP EFLREGAAID DFMRPDRVVV GVESERARKI
MADIYRPLFL RDFPVVFTGL ESAEMIKYAA NAFLATKITF INEIAALCER VGADIKAVSK
GMGLDGRIGN KFLHAGPGYG GSCFPKDTRA LARMGQEHAT PIQIVETVIK VNDEIKRRMI
EKIEDLCEGS CRDKVITVLG VTFKPNTDDM RDAPSLTIVP ALIGAGAKVR VVDPEGRREG
EHLLPGVRWM DDAYAAAEGA SALVILTEWN EFRALDLGRL AGLMAVPRLA DLRNVYEPEA
VRAAGFMACQ AVGRRLDGLP GRGPDQETDR AAAHASGEHA RKTA