Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4096 |
Symbol | |
ID | 5086269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | + |
Start bp | 147418 |
End bp | 148845 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640485659 |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_001170253 |
Protein GI | 146280096 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0662] Mannose-6-phosphate isomerase [COG0836] Mannose-1-phosphate guanylyltransferase |
TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.286853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACGC AGATCCTGCT CTGCGGCGGC TCGGGCACCC GGCTCTGGCC CCTGTCGCGC AAGGGCTTTC CGAAACAGTT CGCCACCATC CTCGGCGGGC GGAGCCTCTT TGCGGCCTCG GCCGAGCGGC TCTCGGGGCC GGGGTTCGGC CGGCCGGTGA TCGTCACCGG TGCTGACTTC CGCTTCGTGG TGACCGAACA GCTGGCCGAG GCGGGCATCG ATCCCGCCGC GATCCTGATC GAGCCCGAGC CGCGCAACAC CGCCCCCGCG ATCCTGGCCG CCGCCCTCCA TGTCGCGGCC CGCGACCCCG AGGCGCTGAT GCTCGTGGCG CCTTCGGACC ATGCGATCGC CGATCCGGCC GCCTTCCGCG AGGCGGTGAT GCGGGGGGCA CCGATCGCGC GCGCGGGCCG CATCGTCACC TTCGGCATCG CCCCCACCCG CGCCGAGACC GGCTATGGCT GGCTCGAGCT CGAGGGGGCC ATGGAGGGGC CTGCGGTCCC GCTCCGGCGG TTCATCGAGA AGCCGGACCG CGCCCATGCG GAGGAGATGC TGGCCGCGGG CCACTTTCTG TGGAACTCCG GGATCTTCCT CTTCTCGGCC GCAACCATCC TGGCCGCCTT CGAGGACCAT GCGCCGGGGC TTCTCGAGCC GGTGCGAGGC GCCGTCGAGG CGGCCGTGCC CGATCTGGGG TTCCTGCGCC TCGCACCGGA GCCCTGGGCC AGGGTCGAGC CGATCTCGAT CGACTATGCG GTGATGGAGC GGGCGTCCAA TCTCTCCGTC GTGCCCTACG CGGGGAGCTG GAACGACCTC GGCGGCTGGG ACGCGGTGGC GCTCGAGATG GGGCCGGACG ACCGGGGCGT GAGCCTCGCG GGCTCGGCCA CCGCACTTGA CTGCCACGAC ACGCTCCTGC GGTCGGACAG CGAGGGCGTG GAGATCGTGG GCATCGGGCT CGAGAACATC ATCGCGGTGG CGATGAAGGA TGCGGTCCTG GTGGCCGACC GCAACCGGGC GCAGGACGTG AAGGCGGCGG TCGAGGCGCT GAAGGCCCGG GGCGCGCGGC AGGCGGAGAA CTTCCTCCAT GACCGCAGGC CCTGGGGCTT CTTCGAGACG CTGGCCCTGG GCGACCGCTT CCAGGTGAAG CGGATCCTGG TCCATCCGGG CGCCGCGCTC TCGCTTCAGA GCCATGTCCA CCGCTCCGAG CACTGGATCG TGGTGCGCGG CACCGCCCGG GTCACGGTCG ACAACGAGGT GCGTCTCGTG ACCGAGAACC AGTCGGTCTA TATTCCGCTC GGCGCCCGCC ACCGGATGGA GAACCCCGGC AAGGTGGCGA TGGAACTGAT CGAGGTGCAG ACCGGCAGCT ATCTGGGCGA GGATGACATC ACGCGCTACG AGGACATCTA CGCCCGCGGC CAGGGCGCGC GGGGCTGA
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Protein sequence | MITQILLCGG SGTRLWPLSR KGFPKQFATI LGGRSLFAAS AERLSGPGFG RPVIVTGADF RFVVTEQLAE AGIDPAAILI EPEPRNTAPA ILAAALHVAA RDPEALMLVA PSDHAIADPA AFREAVMRGA PIARAGRIVT FGIAPTRAET GYGWLELEGA MEGPAVPLRR FIEKPDRAHA EEMLAAGHFL WNSGIFLFSA ATILAAFEDH APGLLEPVRG AVEAAVPDLG FLRLAPEPWA RVEPISIDYA VMERASNLSV VPYAGSWNDL GGWDAVALEM GPDDRGVSLA GSATALDCHD TLLRSDSEGV EIVGIGLENI IAVAMKDAVL VADRNRAQDV KAAVEALKAR GARQAENFLH DRRPWGFFET LALGDRFQVK RILVHPGAAL SLQSHVHRSE HWIVVRGTAR VTVDNEVRLV TENQSVYIPL GARHRMENPG KVAMELIEVQ TGSYLGEDDI TRYEDIYARG QGARG
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