Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4095 |
Symbol | |
ID | 5086268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | + |
Start bp | 145165 |
End bp | 147357 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640485658 |
Product | UDP-glucose 6-dehydrogenase |
Protein accession | YP_001170252 |
Protein GI | 146280095 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.136228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACA TGTCCCGGCC GGTGCAGGCC GCAGAGGAGG ACGAGATCGA TCTCGGACTG CTCATGGCCC GGCTCTGGGC CGGCCGGAAC TGGATCGCGG GCGCGACGGC GGCAGCGGCG CTCCTGGCGA CCGCCCATCT GGCCAACACG CCCCCCACCT ACCGCGCGGA TGCGCTGCTG CAGCTCGAGC CCAAGAGCGG CTCGATGGCG CTGCCGCAGG CCCTGTCCGC CATGGCCGAG ATCGAGCCGC AGAGCGCGAC CGAGGTCGAG ATCCTGCGCT CGCGCTTCGT GCTGGGCGAA GCGGTGGCGG GCACCCATCT CGACTGGCGC GCCGCCCCGG TCCGGCTGCC GCTCCTTGGC CAGGCCGTGG CCTCGGGACG GCTGCCGCTG CCCGAGCTTG ATGTTCTGGT CCCCTATGAC CGGGGCGACG CCCGGATCCG GCTCGACATG CTCGAGGTGC CGCCCGAGTG GATCGGCGAG GAGATCCGGC TGACGGCGGA AGGGGAGGGA CGCTTCACGC TCCTTCTGCC GGACGAAAGC CTCGCCGAGG GCGCGGTGGG CGTGCCGCTC TCGCTGCCCG CGAAGGGGCT CGGCCTGCGG ATCGGGGCGC TCGAGGGCCC CGCGGGGCGC GCGTTCGTGA TCCTGCAGCG CGACGAGACC GAGGCGATCC AGTCGCTGCG GGGGCGGGTT TCGGTCGCCG AGCGCGGGCG GGGCTCGTCC ATCCTCGAGG TGAGCCTGAC GGGGGAAGAT CCGGCCGAGC TGCAGCGCAC GCTGGGCGCG ATCACCGAGG CCTATCTGCG CCAGAACATG AGCCGCAGCG CCGCGGAGGC GCAGAGCAGC CTCGATTTCA TCGAGCGCCA GCTGCCCGAG GCGCGCGCGG CGGTCACAAG GGCCGAGGAG CGGCTGAACG CCTACCGCCA GGCCCAGCAG GCGATCGACC TCGGCTTCGA GGGCCAGAGC CTCCTGACCC AGATCGCCGC CGCCGAGGCC GAGCTGCGCC AGCTTGCGGC CGAGGAGGAG GATCTCGCCG AGCGCTACAC GCAGCAGCAT CCGGTCTATC AGAAACTCCT CTCCGCCCGG GCGCGGCTCG AGGAGCGGCT GGCGGCGCTG CGCCGCGAGA CGACCGAGCT GCCCGAGACC CAGCGCGAGG TCTTCAACCT GACGCGCGAC CTGGAAGTGG CCCAGCAGGT CTATCTGCAG CTTCTGAACC GAGCGCAGGA GCTGGGCGTG CTGAAGGCCA GCACGCTCGG GAACGTGCGC ATCATCGACC ACGCCCGCAC CGAACCCCGG CCGATCGCGC CGCGGCGGGG GCGGGTTCTG GCGCTGGCGC TTCTGCTGGG CGCGCTCGGC GGGGCGGGCT TCGTTCTCGG GCGGCACTGG CTGCGCCGGG GGGTGCGGGG CGCCGAGGAG ATCGACCGGA TGGGGCTGCC GGTCTTTGCC ACGGTGCTCT ATGCCCCTGC GGTGGCCCGC AACCACCGGC AGAAGGGCAC CCTGCCGATC CTGGCCCTGA CCGAGCCCGA CGCGGTGGCG GTCGAAGGGA TCCGGTCGCT CCGGACGAGC CTGCATTTCG GGATGCTGGA CGCGCAGAGC CGGTCGATCG CCCTCACCTC CTCGGCGCCC GAGGCGGGCA AGTCCTTCCT CGCGGTCAAT CTCGCGGTGG TGGCGGCCGA TGCGGGCCAG CGGGTCTGCC TCGTCGACGC CGACCTGCGC CGCGGCCGGA TCCGGCAGTA TTTCAGGGTG GGGAAGGGAG AGCCCGGGCT TTCGGACTAT CTCGCCGGCG AGGCGGCGCT CGAGGATCTT CTGCGGCCGA CCCCGATCCC GGGCCTCCGG GTGATGACGA CGGGCCGCTA TCCGCCGAAC CCGTCCGAGC TCCTGATGCG GCCGGCCCTG TCCGAGCTCG TGGCGGAGCT TGACCGCCGG TTCGACCTCA CGATCTTCGA TGCCCCGCCC GCGCTCGCGG TCACCGATCC CGTGGTGATC GGGCGCGCGG TGGGGGCGAC CATCGCCGTC GTGCGCCACG ATGTCACCAC GACGGGCGAG GTCGAGGCGC TGATGCGCCA GCTCCAGGGC GCGGGCGTGA AGCCCGCGGG CGCGGTGCTC AACGCCTACA AGCCGGAAGC CGGCCGCGGG CCCTATGGCT ACGGATACGG CTATGGCTAC CAGTACAGCT ACCGGCCGCA GGCCAGGGAC TGA
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Protein sequence | MTDMSRPVQA AEEDEIDLGL LMARLWAGRN WIAGATAAAA LLATAHLANT PPTYRADALL QLEPKSGSMA LPQALSAMAE IEPQSATEVE ILRSRFVLGE AVAGTHLDWR AAPVRLPLLG QAVASGRLPL PELDVLVPYD RGDARIRLDM LEVPPEWIGE EIRLTAEGEG RFTLLLPDES LAEGAVGVPL SLPAKGLGLR IGALEGPAGR AFVILQRDET EAIQSLRGRV SVAERGRGSS ILEVSLTGED PAELQRTLGA ITEAYLRQNM SRSAAEAQSS LDFIERQLPE ARAAVTRAEE RLNAYRQAQQ AIDLGFEGQS LLTQIAAAEA ELRQLAAEEE DLAERYTQQH PVYQKLLSAR ARLEERLAAL RRETTELPET QREVFNLTRD LEVAQQVYLQ LLNRAQELGV LKASTLGNVR IIDHARTEPR PIAPRRGRVL ALALLLGALG GAGFVLGRHW LRRGVRGAEE IDRMGLPVFA TVLYAPAVAR NHRQKGTLPI LALTEPDAVA VEGIRSLRTS LHFGMLDAQS RSIALTSSAP EAGKSFLAVN LAVVAADAGQ RVCLVDADLR RGRIRQYFRV GKGEPGLSDY LAGEAALEDL LRPTPIPGLR VMTTGRYPPN PSELLMRPAL SELVAELDRR FDLTIFDAPP ALAVTDPVVI GRAVGATIAV VRHDVTTTGE VEALMRQLQG AGVKPAGAVL NAYKPEAGRG PYGYGYGYGY QYSYRPQARD
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