Gene Rsph17025_4095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4095 
Symbol 
ID5086268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp145165 
End bp147357 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content73% 
IMG OID640485658 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_001170252 
Protein GI146280095 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.136228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA TGTCCCGGCC GGTGCAGGCC GCAGAGGAGG ACGAGATCGA TCTCGGACTG 
CTCATGGCCC GGCTCTGGGC CGGCCGGAAC TGGATCGCGG GCGCGACGGC GGCAGCGGCG
CTCCTGGCGA CCGCCCATCT GGCCAACACG CCCCCCACCT ACCGCGCGGA TGCGCTGCTG
CAGCTCGAGC CCAAGAGCGG CTCGATGGCG CTGCCGCAGG CCCTGTCCGC CATGGCCGAG
ATCGAGCCGC AGAGCGCGAC CGAGGTCGAG ATCCTGCGCT CGCGCTTCGT GCTGGGCGAA
GCGGTGGCGG GCACCCATCT CGACTGGCGC GCCGCCCCGG TCCGGCTGCC GCTCCTTGGC
CAGGCCGTGG CCTCGGGACG GCTGCCGCTG CCCGAGCTTG ATGTTCTGGT CCCCTATGAC
CGGGGCGACG CCCGGATCCG GCTCGACATG CTCGAGGTGC CGCCCGAGTG GATCGGCGAG
GAGATCCGGC TGACGGCGGA AGGGGAGGGA CGCTTCACGC TCCTTCTGCC GGACGAAAGC
CTCGCCGAGG GCGCGGTGGG CGTGCCGCTC TCGCTGCCCG CGAAGGGGCT CGGCCTGCGG
ATCGGGGCGC TCGAGGGCCC CGCGGGGCGC GCGTTCGTGA TCCTGCAGCG CGACGAGACC
GAGGCGATCC AGTCGCTGCG GGGGCGGGTT TCGGTCGCCG AGCGCGGGCG GGGCTCGTCC
ATCCTCGAGG TGAGCCTGAC GGGGGAAGAT CCGGCCGAGC TGCAGCGCAC GCTGGGCGCG
ATCACCGAGG CCTATCTGCG CCAGAACATG AGCCGCAGCG CCGCGGAGGC GCAGAGCAGC
CTCGATTTCA TCGAGCGCCA GCTGCCCGAG GCGCGCGCGG CGGTCACAAG GGCCGAGGAG
CGGCTGAACG CCTACCGCCA GGCCCAGCAG GCGATCGACC TCGGCTTCGA GGGCCAGAGC
CTCCTGACCC AGATCGCCGC CGCCGAGGCC GAGCTGCGCC AGCTTGCGGC CGAGGAGGAG
GATCTCGCCG AGCGCTACAC GCAGCAGCAT CCGGTCTATC AGAAACTCCT CTCCGCCCGG
GCGCGGCTCG AGGAGCGGCT GGCGGCGCTG CGCCGCGAGA CGACCGAGCT GCCCGAGACC
CAGCGCGAGG TCTTCAACCT GACGCGCGAC CTGGAAGTGG CCCAGCAGGT CTATCTGCAG
CTTCTGAACC GAGCGCAGGA GCTGGGCGTG CTGAAGGCCA GCACGCTCGG GAACGTGCGC
ATCATCGACC ACGCCCGCAC CGAACCCCGG CCGATCGCGC CGCGGCGGGG GCGGGTTCTG
GCGCTGGCGC TTCTGCTGGG CGCGCTCGGC GGGGCGGGCT TCGTTCTCGG GCGGCACTGG
CTGCGCCGGG GGGTGCGGGG CGCCGAGGAG ATCGACCGGA TGGGGCTGCC GGTCTTTGCC
ACGGTGCTCT ATGCCCCTGC GGTGGCCCGC AACCACCGGC AGAAGGGCAC CCTGCCGATC
CTGGCCCTGA CCGAGCCCGA CGCGGTGGCG GTCGAAGGGA TCCGGTCGCT CCGGACGAGC
CTGCATTTCG GGATGCTGGA CGCGCAGAGC CGGTCGATCG CCCTCACCTC CTCGGCGCCC
GAGGCGGGCA AGTCCTTCCT CGCGGTCAAT CTCGCGGTGG TGGCGGCCGA TGCGGGCCAG
CGGGTCTGCC TCGTCGACGC CGACCTGCGC CGCGGCCGGA TCCGGCAGTA TTTCAGGGTG
GGGAAGGGAG AGCCCGGGCT TTCGGACTAT CTCGCCGGCG AGGCGGCGCT CGAGGATCTT
CTGCGGCCGA CCCCGATCCC GGGCCTCCGG GTGATGACGA CGGGCCGCTA TCCGCCGAAC
CCGTCCGAGC TCCTGATGCG GCCGGCCCTG TCCGAGCTCG TGGCGGAGCT TGACCGCCGG
TTCGACCTCA CGATCTTCGA TGCCCCGCCC GCGCTCGCGG TCACCGATCC CGTGGTGATC
GGGCGCGCGG TGGGGGCGAC CATCGCCGTC GTGCGCCACG ATGTCACCAC GACGGGCGAG
GTCGAGGCGC TGATGCGCCA GCTCCAGGGC GCGGGCGTGA AGCCCGCGGG CGCGGTGCTC
AACGCCTACA AGCCGGAAGC CGGCCGCGGG CCCTATGGCT ACGGATACGG CTATGGCTAC
CAGTACAGCT ACCGGCCGCA GGCCAGGGAC TGA
 
Protein sequence
MTDMSRPVQA AEEDEIDLGL LMARLWAGRN WIAGATAAAA LLATAHLANT PPTYRADALL 
QLEPKSGSMA LPQALSAMAE IEPQSATEVE ILRSRFVLGE AVAGTHLDWR AAPVRLPLLG
QAVASGRLPL PELDVLVPYD RGDARIRLDM LEVPPEWIGE EIRLTAEGEG RFTLLLPDES
LAEGAVGVPL SLPAKGLGLR IGALEGPAGR AFVILQRDET EAIQSLRGRV SVAERGRGSS
ILEVSLTGED PAELQRTLGA ITEAYLRQNM SRSAAEAQSS LDFIERQLPE ARAAVTRAEE
RLNAYRQAQQ AIDLGFEGQS LLTQIAAAEA ELRQLAAEEE DLAERYTQQH PVYQKLLSAR
ARLEERLAAL RRETTELPET QREVFNLTRD LEVAQQVYLQ LLNRAQELGV LKASTLGNVR
IIDHARTEPR PIAPRRGRVL ALALLLGALG GAGFVLGRHW LRRGVRGAEE IDRMGLPVFA
TVLYAPAVAR NHRQKGTLPI LALTEPDAVA VEGIRSLRTS LHFGMLDAQS RSIALTSSAP
EAGKSFLAVN LAVVAADAGQ RVCLVDADLR RGRIRQYFRV GKGEPGLSDY LAGEAALEDL
LRPTPIPGLR VMTTGRYPPN PSELLMRPAL SELVAELDRR FDLTIFDAPP ALAVTDPVVI
GRAVGATIAV VRHDVTTTGE VEALMRQLQG AGVKPAGAVL NAYKPEAGRG PYGYGYGYGY
QYSYRPQARD