| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_4093 |
|---|
| Symbol | |
|---|
| ID | 5086266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009430 |
|---|
| Strand | + |
|---|
| Start bp | 143645 |
|---|
| End bp | 144715 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640485656 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170250 |
|---|
| Protein GI | 146280093 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.818341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.104815 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCACC GACTGACGGT TGTTCTTGTG GGAAGCCTGC CGGTTCTCGC AGGCTGTTCG
GAAGGCCATG TGCGCTTTCC GGTGACGGAG AGCGCGCAGA AGGCGCTTCC GGAGAATGTG
CAGGTGATCC GGCTGGATGC GGAGAACATC CGCAGCTTCG AGGTGCCGGC GGAACCGCAC
CAGGCGACGC GGCTGCCGGC CGGCGGAGGA TGGGACTACC GGATCGGGGT GGGGGACATC
CTGGGGATCA CGGTGTTCGA CCATCCCGAA CTCATGCTGC CGGGGGGCGA GAAGACCGCC
GGGGAGAGCG GCTTCCGGGT GCAGGGGGAC GGGACGGTGG CCTTTCCCTA CGTGGGGGCG
GTGCGGGCGA AGGGCCGGGC GCCGGAGGAG GTGCGCGAGG AACTCCGGAC GCGGCTTGCG
GCCTTCATCC CCGAGCCGCA GGTGGATGTG CGGGTGACGG CCTTCAACTC GCAGGCGGTG
AGCGTGACGG GGGAGGTGAG AACCCCGAAC CGGCAGGCGC TGACCACGGT CGAACTGACG
CTTCTCGATG CCATCAACGC GGCGGGGGGA CTGGCCGAGA CGGCGGACGC GCGGCGGGTG
ACGGTCCGGC GCGGCACGAG CTCCTACAGG GTCGATCTCG AGGGGTTCCT GACCGCGGGG
CTCGGGAGCA ACAACCCGGT ATTGCGGCCG GGCGACATCG TCACGGTGCC GCGCCGGCAG
GCGCGCGAGG CCTATCTTCT GGGCGAGATC GTGAAGCCCG CGGCGGTCGA TCTTTCGGTC
GAGCCGCTGA CACTGACCCA GGCGCTGAGC CGGCAGGGCG GCATTCTCGA GCGGCGGGCG
GATGCGCGGG GGGTCTTCGT CTTCCGCGCG AACGGCGCTC CGGGCATGAA GGTGTTCCAG
CTCGATGCGC GCTCGCCCAC GGCGCTTCTC CTGGGGACAC GGTTCCTGCT GCAGCCGGGG
GATGTGGTCT ATGTGACGCG CGCGCCGCTC AGCCGCTGGA ACGACACGAT CAGCGACCTG
CTGCCCTCGG TGGGGATCAC CAGCAGCCTC GACCGGCTGG GGACGAACTG A
|
|---|
| Protein sequence | MLHRLTVVLV GSLPVLAGCS EGHVRFPVTE SAQKALPENV QVIRLDAENI RSFEVPAEPH
QATRLPAGGG WDYRIGVGDI LGITVFDHPE LMLPGGEKTA GESGFRVQGD GTVAFPYVGA
VRAKGRAPEE VREELRTRLA AFIPEPQVDV RVTAFNSQAV SVTGEVRTPN RQALTTVELT
LLDAINAAGG LAETADARRV TVRRGTSSYR VDLEGFLTAG LGSNNPVLRP GDIVTVPRRQ
AREAYLLGEI VKPAAVDLSV EPLTLTQALS RQGGILERRA DARGVFVFRA NGAPGMKVFQ
LDARSPTALL LGTRFLLQPG DVVYVTRAPL SRWNDTISDL LPSVGITSSL DRLGTN
|
|---|
| |