Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4089 |
Symbol | |
ID | 5086262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | + |
Start bp | 139603 |
End bp | 140448 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640485652 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001170246 |
Protein GI | 146280089 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4208] ABC-type sulfate transport system, permease component |
TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein [TIGR02140] sulfate ABC transporter, permease protein CysW |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.135266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACA CCCCCTCCCT GCCCCTTCCC GCCACCGCCG AGCCCGTCTG GCTGCGCCGG CTGCTCATCC TCGGCACGCT CGCGGTGCTG GCCCTACTGG TGCTGGCCCC GCTGGCGATC GTCTTCGTCG AGGCGCTGAA GGACGGCGTG GCGCTCGCGC TCGCCGCGCT CGGCAGCCGC GACGCGCAGG CGGCGATCCG GCTGACGCTG GCGGTGGCGG CCGTCTCGGT GCCGCTGAAC GCCGCCGCCT GGGCGGTCAC CAAGTTCGAC TGGCGCGGCA AGGCGCTGCT CATCACGCTG ATCGACCTGC CCTTCTCGGT CTCGCCCGTG GTGGCGGGGC TGTCGTTCGT GCTGCTCTTC GGCGCCAACT CGGCCCTGGG CGGCTGGCTG GTGGCGAACG GCCTTCCCAT CGTCTTCGCG ATCCCCGGCA TCGTGCTGGC CACCCTGTTC ATCACCTTCC CCTTCGTCGC GCGCGAGCTG ATCCCGGTGA TGACCGAACA GGGCCGCGCC GAGGAGGAGG CCGCGCTGAC GCTGGGGGCC TCTGGCTGGC GCACCTTCCT GACCGTCACG CTGCCCAACA TCCGCTGGGC GCTGCTGTAC GGCGTGCTGC TCTGCAACGC CCGCGCGATG GGCGAGTTCG GCGCCGTCGC CGTCGTCTCG GGCAAGATCC GCGGCAAGAC CACGACCATG CCGATCATGA TCGAGATGTT CTACAACGAA TATCTCTCGG TCGCGGCCTT CGCGATGGCG GCGCTGCTGG CGCTTCTGGC CCTCGTCACG CTCACGCTGA AATCGGTCTT GGAATGGCGC CATGCCGACC AGCTGGCCGC CACCCACCGC CATTGA
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Protein sequence | MSHTPSLPLP ATAEPVWLRR LLILGTLAVL ALLVLAPLAI VFVEALKDGV ALALAALGSR DAQAAIRLTL AVAAVSVPLN AAAWAVTKFD WRGKALLITL IDLPFSVSPV VAGLSFVLLF GANSALGGWL VANGLPIVFA IPGIVLATLF ITFPFVAREL IPVMTEQGRA EEEAALTLGA SGWRTFLTVT LPNIRWALLY GVLLCNARAM GEFGAVAVVS GKIRGKTTTM PIMIEMFYNE YLSVAAFAMA ALLALLALVT LTLKSVLEWR HADQLAATHR H
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