Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4083 |
Symbol | |
ID | 5086256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | - |
Start bp | 134869 |
End bp | 135315 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640485646 |
Product | hypothetical protein |
Protein accession | YP_001170240 |
Protein GI | 146280083 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.430645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0288614 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCCA GCCCCGGTGC CCTTCCAGAG GGGAGGATCG CTCGGCCTCC GGGGGCAACC GAGCCGCCAT TCCCGCCGGA GCGGGACAAG GAAAGACCAA GACCGATGAG CTACAAACAG AAGATCGACG ACATCCGCGA CGAGCTGCGC GCGCTCTACA AGGCCGCCCC CGAGCAGACC CGGGGCTTCG GCGCCCTCTC GAAGGCGGTC AAGGAGAGCG GCGTCCTTGG CCACAAGGAA AAGGAATTCG TGGCGCTCGG CATGGCGCTG GTGCAGCGCT GCGAGCCCTG CATCGTGCTC CATGTCGAGG CGCTGATGAA GGCCGGAGCC AGCCGCGAGG AACTAGGCGA CGTGCTGGCC ATGGCGATCC AGATGAGCGG CGGGCCCGGC ATGATGTATG CCGCCAAGGC CCTCGCCTGC TGGGACGAGC TGGCCGCCGC CAGCTGA
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Protein sequence | MRASPGALPE GRIARPPGAT EPPFPPERDK ERPRPMSYKQ KIDDIRDELR ALYKAAPEQT RGFGALSKAV KESGVLGHKE KEFVALGMAL VQRCEPCIVL HVEALMKAGA SREELGDVLA MAIQMSGGPG MMYAAKALAC WDELAAAS
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