Gene Rsph17025_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4083 
Symbol 
ID5086256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp134869 
End bp135315 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content68% 
IMG OID640485646 
Producthypothetical protein 
Protein accessionYP_001170240 
Protein GI146280083 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.430645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0288614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCCA GCCCCGGTGC CCTTCCAGAG GGGAGGATCG CTCGGCCTCC GGGGGCAACC 
GAGCCGCCAT TCCCGCCGGA GCGGGACAAG GAAAGACCAA GACCGATGAG CTACAAACAG
AAGATCGACG ACATCCGCGA CGAGCTGCGC GCGCTCTACA AGGCCGCCCC CGAGCAGACC
CGGGGCTTCG GCGCCCTCTC GAAGGCGGTC AAGGAGAGCG GCGTCCTTGG CCACAAGGAA
AAGGAATTCG TGGCGCTCGG CATGGCGCTG GTGCAGCGCT GCGAGCCCTG CATCGTGCTC
CATGTCGAGG CGCTGATGAA GGCCGGAGCC AGCCGCGAGG AACTAGGCGA CGTGCTGGCC
ATGGCGATCC AGATGAGCGG CGGGCCCGGC ATGATGTATG CCGCCAAGGC CCTCGCCTGC
TGGGACGAGC TGGCCGCCGC CAGCTGA
 
Protein sequence
MRASPGALPE GRIARPPGAT EPPFPPERDK ERPRPMSYKQ KIDDIRDELR ALYKAAPEQT 
RGFGALSKAV KESGVLGHKE KEFVALGMAL VQRCEPCIVL HVEALMKAGA SREELGDVLA
MAIQMSGGPG MMYAAKALAC WDELAAAS