| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_4062 |
|---|
| Symbol | |
|---|
| ID | 5086235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009430 |
|---|
| Strand | - |
|---|
| Start bp | 106242 |
|---|
| End bp | 107150 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640485625 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170219 |
|---|
| Protein GI | 146280062 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.228225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.120917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGCA CGCTGCGCCA GTTGCAGGTC TTCGCCTCGG TCGCCCGGCA CGCCAGCTAC
ACCCGCGCGG CCGAAGAGCT GCACCTGACC CAGCCCGCCG TCTTCGCGCA GGTCAAGCAG
CTGGAGGAGG CGCTGGCGGT GGTGCTGATC GAACGGATCG GCAAGCGGCT GCACCTGACC
GAGGCGGGCC GCGCGGTGGA GGCCACGGCG CGCGAGACGC TGGAGGGGAT CGAGCGGCTC
GAGATGCAGC TGGCCGACCT TCAGGGCCTG CGGCGCGGGC GGCTGAAGAT CGCCATCGTC
TCGACCGTGC AGTATTTTCT GCCGCGGCTC CTGGGCGAGT TCTGCACGCT GAACCCCGGC
ATCGAGGTGG CGCTGACCGT CACCAACCGA CAGACGGTGA TCGCGCGGCT GGCCGCGAAC
GAGGACGATC TGTGCATCCT CGGCCAGCCG CCCGAGGGGC TCGACGTGGT GGCGACCCCC
GTGGCGCAGA ACCCGATCCT GCTGCTCGCG CCGGCCGATC ATCCGCTGGC CGGGGCGCGG
GCCGTGCCCT TCGCGGAGCT GGCCGAGGCG CCCTTCATCC TGCGCGAGCC CGGCTCAGGC
ACCCGCGCCG CCGCGGAACG GTTCTTCGCC GACTGCGGCG TCCGGCCGCG GGTGCGGATG
GAGCTGGGCT CGAACGAGGC GATCAAGGAG GCGGTGGCGG CGGGGCTGGG GCTTGCGATC
CTGTCGCAGG ACACGATGGC GGTCGAGGCG GCGACGCGCC GGCTGGTGGC GCTGGACGTG
CAGGGCTTTC CGCTGATGCG GGTGTGGAAC GTGGCCTATC CCCGCGGCAA GCACCTCTCG
GTGGCGGCCG CGGCCTTCCT GGCCCATCTG ACGCAGGGAG CGCCCTCTCA GATCGCGAGC
CACAGGTAA
|
|---|
| Protein sequence | MRCTLRQLQV FASVARHASY TRAAEELHLT QPAVFAQVKQ LEEALAVVLI ERIGKRLHLT
EAGRAVEATA RETLEGIERL EMQLADLQGL RRGRLKIAIV STVQYFLPRL LGEFCTLNPG
IEVALTVTNR QTVIARLAAN EDDLCILGQP PEGLDVVATP VAQNPILLLA PADHPLAGAR
AVPFAELAEA PFILREPGSG TRAAAERFFA DCGVRPRVRM ELGSNEAIKE AVAAGLGLAI
LSQDTMAVEA ATRRLVALDV QGFPLMRVWN VAYPRGKHLS VAAAAFLAHL TQGAPSQIAS
HR
|
|---|
| |