Gene Rsph17025_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4060 
Symbol 
ID5086233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp104275 
End bp105210 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content73% 
IMG OID640485623 
Producthypothetical protein 
Protein accessionYP_001170217 
Protein GI146280060 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0282036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.215669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGC GCCCCACCCT GCGCCAGCTG GAATATATCG TGGCCGTGGC CCGGCTCGGC 
CGCTTCGGTC TGGCGGCCGA GGCCCTGGCC GTCAGCCAGC CGAGCCTCTC GGCGCAGATC
GCCGAGGTCG AGGCCGATCT GGGAACGCGG CTCTTCCAGC GCGGACGCTC GGGCGTGCAG
CCCACCGCGG CGGGCGCCGA GGTGATCCGC CGCGCCCAGA AAATCCTGCG CGAGGTCGAG
GATCTGCGCG CCAGCGTTAC CCATGGCCTG CCCTTCGGCG GGCGGCTGCG GCTGGGGGTG
CTGCCCTCGA TCGGGCCCTA CCTGCTGCCG GGGGCGATCG CCTCGATCCA CCGCCAGCAC
CCCGACCTGC GGGTGGCCGT GCGCGAGGAG AACACGCACG GTCTGGAACA GGGTCTGCGC
GCCGGCCGCT TCGATCTGAT CGTCTCGACG CCCGAGGATC ATCCCAACAC GCGCCAGATC
CATCTCTTCG GCGAGCGGCT GTGGATCGCG GTGGCACGGG ACGATCCGCT GGCGGCGTCG
GAGGGTCCGG TGGCGGCCGC CGATCTGCGC GGACGGATGT TCCTGACGCT CGACCGCGGG
CACCGGCTGT CGCGGATCGT CCATGCGCTG GCCTCAAGCT GCGGCGGGAT CGTCTCGGAC
GATTACGAGG GGACGAGCCT CGATTCCGTA CGCCTGATGG CGGCCTCGGG GGCCGGCATC
GCAATCCTGC CCCAGCTTTA CGCCCGCGAG CAGGCCGCGC TGCGCCGCGA TGTCGCCCTG
CGGCTTCTGC GCGCCGAGGG CGCCAGCCGC GACATCGCCC TGATCCGGCC GATCGGCGGG
GATGAGGCGG GGCCGGATCT GGTCCAGGCC GCCCTGCATC AGGCGGTCGC GGCGCTTGGC
CTGGCGGGCG AGGCTCTGCG GTCCGGTCCC GCCTGA
 
Protein sequence
MDMRPTLRQL EYIVAVARLG RFGLAAEALA VSQPSLSAQI AEVEADLGTR LFQRGRSGVQ 
PTAAGAEVIR RAQKILREVE DLRASVTHGL PFGGRLRLGV LPSIGPYLLP GAIASIHRQH
PDLRVAVREE NTHGLEQGLR AGRFDLIVST PEDHPNTRQI HLFGERLWIA VARDDPLAAS
EGPVAAADLR GRMFLTLDRG HRLSRIVHAL ASSCGGIVSD DYEGTSLDSV RLMAASGAGI
AILPQLYARE QAALRRDVAL RLLRAEGASR DIALIRPIGG DEAGPDLVQA ALHQAVAALG
LAGEALRSGP A