Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4060 |
Symbol | |
ID | 5086233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | - |
Start bp | 104275 |
End bp | 105210 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640485623 |
Product | hypothetical protein |
Protein accession | YP_001170217 |
Protein GI | 146280060 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0282036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.215669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGC GCCCCACCCT GCGCCAGCTG GAATATATCG TGGCCGTGGC CCGGCTCGGC CGCTTCGGTC TGGCGGCCGA GGCCCTGGCC GTCAGCCAGC CGAGCCTCTC GGCGCAGATC GCCGAGGTCG AGGCCGATCT GGGAACGCGG CTCTTCCAGC GCGGACGCTC GGGCGTGCAG CCCACCGCGG CGGGCGCCGA GGTGATCCGC CGCGCCCAGA AAATCCTGCG CGAGGTCGAG GATCTGCGCG CCAGCGTTAC CCATGGCCTG CCCTTCGGCG GGCGGCTGCG GCTGGGGGTG CTGCCCTCGA TCGGGCCCTA CCTGCTGCCG GGGGCGATCG CCTCGATCCA CCGCCAGCAC CCCGACCTGC GGGTGGCCGT GCGCGAGGAG AACACGCACG GTCTGGAACA GGGTCTGCGC GCCGGCCGCT TCGATCTGAT CGTCTCGACG CCCGAGGATC ATCCCAACAC GCGCCAGATC CATCTCTTCG GCGAGCGGCT GTGGATCGCG GTGGCACGGG ACGATCCGCT GGCGGCGTCG GAGGGTCCGG TGGCGGCCGC CGATCTGCGC GGACGGATGT TCCTGACGCT CGACCGCGGG CACCGGCTGT CGCGGATCGT CCATGCGCTG GCCTCAAGCT GCGGCGGGAT CGTCTCGGAC GATTACGAGG GGACGAGCCT CGATTCCGTA CGCCTGATGG CGGCCTCGGG GGCCGGCATC GCAATCCTGC CCCAGCTTTA CGCCCGCGAG CAGGCCGCGC TGCGCCGCGA TGTCGCCCTG CGGCTTCTGC GCGCCGAGGG CGCCAGCCGC GACATCGCCC TGATCCGGCC GATCGGCGGG GATGAGGCGG GGCCGGATCT GGTCCAGGCC GCCCTGCATC AGGCGGTCGC GGCGCTTGGC CTGGCGGGCG AGGCTCTGCG GTCCGGTCCC GCCTGA
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Protein sequence | MDMRPTLRQL EYIVAVARLG RFGLAAEALA VSQPSLSAQI AEVEADLGTR LFQRGRSGVQ PTAAGAEVIR RAQKILREVE DLRASVTHGL PFGGRLRLGV LPSIGPYLLP GAIASIHRQH PDLRVAVREE NTHGLEQGLR AGRFDLIVST PEDHPNTRQI HLFGERLWIA VARDDPLAAS EGPVAAADLR GRMFLTLDRG HRLSRIVHAL ASSCGGIVSD DYEGTSLDSV RLMAASGAGI AILPQLYARE QAALRRDVAL RLLRAEGASR DIALIRPIGG DEAGPDLVQA ALHQAVAALG LAGEALRSGP A
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