Gene Rsph17025_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4021 
Symbol 
ID5086195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp52059 
End bp53411 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content69% 
IMG OID640485579 
Producthypothetical protein 
Protein accessionYP_001170179 
Protein GI146280022 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAAT ACGAATGTGT GGAGGGGGGA ACGGACATGA CGCAGAGGGG AACGGGGTTC 
ACGCGGCGCG GGATCATGGG GCTGGGGGCC GCAGGGCTCG CCCTGGCGGC CTCGGCTCCG
GGACCGGCAC GGGCCGAGAA GGTCAGGACA CCGGCGCGGA TCCTGATCCT CGGCGCGGGC
GCGGCGGGGA CGACCTTCGC CAACCGGATG GTCGAGCGGC TGGAGGGGGC CGAGATCACC
CTGCTCGACG ACCGGCTGCA GCATTTCTAC CAGCCGGGTT TCTCGCTGAT CGGGGCCGGG
CTGAAGCCTG CGCGCTACGC CGTCAGCCCC ACCGGAGAAT GGCTGCCCGC GGGCGTCCGC
TGGATCAAGG AGAAGGCGGC CGAGATCGAC CCGGTCGGCA AGGCCGTCAC CACGGCCAAG
GGCACGCGCC TTGCCTATGA CTACCTGATC GTGGCCACGG GGCTCGTGCT GGACTACGGC
GCGATCGAGG GCTTTTCGCC CGAGATGATC GGCACGGGCG GCATCGGCTC GGTCTATGCC
GGCTCCGACG CGGCCGCGCG CACCTGGACC GCCGCCGCGC GTTTCGCCGA AGAGGGCGGC
CAGGGACTCT TCACCCGCCC CGCGACCGAG ATGAAATGCG CGGGCGCGCC GCTCAAGCAC
ACCTTCCTGA TCGACGACAT CGCCCGCAGC CGCGGCGGCC GCCCGAAGGC CGAGTTCACC
TATTTCTCGA ACAACGAGAC GCTCTTCTCG GTGCCGATCG TGCACGAAAA GCTGCGGATG
CTGTTCGGCA ACCGCGGGAT CGCCACCGCC CCCTCGCATG TGCTGACCGC AATCGAGCCG
GGCCAGCGGC GCGCCTTCTT CCGCACCCCC GAGGGCTTGG TCGAGCGGCC CTACGACTAC
ATCCACGTCA TCCCGCCGAT GCGCGCCCCC GAGGTGGTGC GGAACTCGCC CCTGCCCTGG
GCCGACAGAT GGACGGATCA GGGCTGGGTC GAGGTGGACA TGGGAACCCT GCGCCACAGC
CGCTTCCCCG AGGTCTTCGC GATCGGCGAC GTGGCGGGCG TGCCCAAGGG CAAGACCGCG
GCCTCGGTCA AATGGCAGGT GCCGGTGGTC GAGGATCATC TGATCGCCGC AATCGAGGGG
CGCGAGGGCA CGGCGAGCTA CAACGGCTAC ACCTCGTGCC CGATGATCAC CCGCGTCGGC
CGCGCCATGC TGATCGAGTT CGACTACCAG AACAACCTGG TCGAGAGCTT CCCCGGCCTC
GTGGCCCCGC TCGAGGAACT CTGGATCTCG TGGCTGATGA AGGAGATCGC CCTGAAAGCC
ACCTACAACG CCATGCTGCG CGGTCGCGCC TGA
 
Protein sequence
MRQYECVEGG TDMTQRGTGF TRRGIMGLGA AGLALAASAP GPARAEKVRT PARILILGAG 
AAGTTFANRM VERLEGAEIT LLDDRLQHFY QPGFSLIGAG LKPARYAVSP TGEWLPAGVR
WIKEKAAEID PVGKAVTTAK GTRLAYDYLI VATGLVLDYG AIEGFSPEMI GTGGIGSVYA
GSDAAARTWT AAARFAEEGG QGLFTRPATE MKCAGAPLKH TFLIDDIARS RGGRPKAEFT
YFSNNETLFS VPIVHEKLRM LFGNRGIATA PSHVLTAIEP GQRRAFFRTP EGLVERPYDY
IHVIPPMRAP EVVRNSPLPW ADRWTDQGWV EVDMGTLRHS RFPEVFAIGD VAGVPKGKTA
ASVKWQVPVV EDHLIAAIEG REGTASYNGY TSCPMITRVG RAMLIEFDYQ NNLVESFPGL
VAPLEELWIS WLMKEIALKA TYNAMLRGRA