Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4012 |
Symbol | |
ID | 5086186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | - |
Start bp | 41591 |
End bp | 42328 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640485570 |
Product | hypothetical protein |
Protein accession | YP_001170170 |
Protein GI | 146280013 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCTACT CGGTCGAGAA CCCGCGCGCC TATCTCGACG CGAACGTGAT CGGCTCCTTC ACCGTGATGG AGGCTGCGCG GCGGCTGAAG GTCGCCCACC TGATGATGGC CTCGACCCTC CTCGGTCTAT GGCGCGAACG AGGAGATGCC CTTCCGCGAG ACCGACAAGG CCGACAGCCA GCTCACCATC TACTCGGCCA CCAAGAAGGC CAACGAGAGC ATGGGCCACG CCTGGGCCCA TCCGCATGGC GTGCTGGTCA CCATGTTTCG CTTCTTCACC GTCTACGGGC CCTGCGGGCG GCCCGACCTC GCGCTGTTCA AGTTCGTCGA CGCGATTCTC GACGGCCGGC CGATCGACAT CTACAACCAC GGCGAGATGT GGCGCGACTT CACCTATGTG GACGATCTGG TGCGTGCGAT CCGGCTTCTG ATCGAGGCCG TGCCCGGAGG CCCCGAGACG GCGGTCGAGG AGGACAGCCT CTCGCCCGCC GCCCCGTTCG CATCGTCAAC ATCGGCAATT CCGACAAGGT GCGGCTTCTC GATTTCACCG AGGCGATCGA GGAGAGCCTC GGGCAGACAG CCGTCCGCAA CTACATGCCG ATGCAACAGG GCGACGTGCC CGCGACCTGG GCCGAGGCGG GGCTTCTGCA GCGCCTGACC GGCTACCGCC CGCAGACCGA CATCCGCGAC GGCATCGCGC GCTTCGTCGC GTGGTATCGC GAATATTCGG GGAAGTAG
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Protein sequence | MRYSVENPRA YLDANVIGSF TVMEAARRLK VAHLMMASTL LGLWRERGDA LPRDRQGRQP AHHLLGHQEG QREHGPRLGP SAWRAGHHVS LLHRLRALRA ARPRAVQVRR RDSRRPADRH LQPRRDVARL HLCGRSGACD PASDRGRARR PRDGGRGGQP LARRPVRIVN IGNSDKVRLL DFTEAIEESL GQTAVRNYMP MQQGDVPATW AEAGLLQRLT GYRPQTDIRD GIARFVAWYR EYSGK
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