Gene Rsph17025_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4001 
Symbol 
ID5086176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp28341 
End bp29303 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID640485560 
Producthypothetical protein 
Protein accessionYP_001170160 
Protein GI146280003 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.891502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA CCGCGCGCAT CTGTGCGGTC GTCGTGACCT ACAACCGCAT CGACCAGATG 
CAGAAGACGG TCGCGCGCCT GCTGGAAGAG CCGATCGATC ATCTGGTGGT CGTGGACAAT
GGCTCTTCCG ATGGCAGCCG CGATTGGCTG CGCGCCTGCA CCGACCCGCG GCTCGAACTG
CTCGAGATGG CGCGCAACAT TGGTGGGGCC GGCGGGTTCG AGACTGGTCT GCGCCATGTC
GTTTCCGTTC TAGATCCCGA CTGGATCGTG CTCATGGACG ATGATGCCCG GCCCGAGCCG
GGATGTGTGG CGATGTTCCG AGCGGCTGAC AAGACAGGCT GGGACGCCAT CGCTGCGGCT
GTGTTCTTTC CGGACGGGCG GATCTGCAGC ATGAACCGTC CGGTCCTGAA CCCGTTCTGG
CATCCGCGTA TCTTTCTGCG CACGCTGGCC GGCGGTGGCC GTGCAGCCTT CCACCTGACT
GATCGCGACT ACGACCAGGC CATGCCGCAG CGCGTCGATG GTGGCTCGTT CGTCGGCCTG
TTCCTGGCGC GACGCGCCGT GGAGGTGGCG GGGTATCCCG ATGGACGGCT GTTCGTTTAT
GCCGAAGACG GTCTCTATTC CCTCGCCATC AGCGGGAATG GCGGCCGGGT GGGGTTCTTT
CCGCAGTTGC GGTTCGAGCA TGAATGCTCG ACCTTCTCGG CAAGTGGCCA GTTCACGCCG
ATCTGGAAGG TCTATTTCTA CCATCGCAAC CTGCTGCTGC TCTACCGACG CGCGGCCGGG
ATCTGGTTCT GGCCCGCGCT GCTGGCCGTC TTGCCGAAGT GGGTATTGCG CGGGCTGAGA
CAGAAGGGCG AGCGCCTGCG TTTCCTGCGC CTGCTCGGCT GGGCGGTGCG TGATGGCCTG
ACGCGGCGGG TGGGCTGGAC GCTGGACGAT CTGCAGCAGG AGATGCGGCG TCGTGATGTA
TGA
 
Protein sequence
MNRTARICAV VVTYNRIDQM QKTVARLLEE PIDHLVVVDN GSSDGSRDWL RACTDPRLEL 
LEMARNIGGA GGFETGLRHV VSVLDPDWIV LMDDDARPEP GCVAMFRAAD KTGWDAIAAA
VFFPDGRICS MNRPVLNPFW HPRIFLRTLA GGGRAAFHLT DRDYDQAMPQ RVDGGSFVGL
FLARRAVEVA GYPDGRLFVY AEDGLYSLAI SGNGGRVGFF PQLRFEHECS TFSASGQFTP
IWKVYFYHRN LLLLYRRAAG IWFWPALLAV LPKWVLRGLR QKGERLRFLR LLGWAVRDGL
TRRVGWTLDD LQQEMRRRDV