Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3999 |
Symbol | |
ID | 5086174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | + |
Start bp | 25763 |
End bp | 26947 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640485558 |
Product | nitroreductase |
Protein accession | YP_001170158 |
Protein GI | 146280001 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.483362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAAGCGT TCGTTTCAAA AATAGAGCAG AGGACTGTGC AACATATGCC TGTCAACGAG AAACGTCAGC TTGTTCTTCA TATCGGCGAC CCGAAGACGG GTACGTCATC CATTCAAAGA GCGCTCCAGT TGGGACTGGT GGACGGCATG TGCGGGAAGG TGTCTGCCTT CACCACTGAT AACGGGAGCG CGAACGCGGT GTCGTTGGCG AGAAGCTTCA ATCGAAAAGG TAGGACCCGG GTCAAGACGG AAATGCAGCC GGTAATGAAG TGGCTCAGCA GCACGACCAC GCCTTATGCA GTCATTTCTT CGGAATTCTT CTCGAATGCG GATCCCTCCA TGGTTCGCAG AGCCTTTGCC AGAAGGTATC CGGCGCTTAC ATCTAATATC AAGGTCATAG CTTACGCCCG CCCGCATGTC GGACGTACAC TCGCTGCCTA TTCCGAGCGC GTGAAATGTG GGTATACCTT GAGCGACTTC GATCAATGGC TGCCTGTCTT CATGAAATCA GCCTTCATCC GCTATCATCT TCGTTTCAAG AAGTGGCGAG ATGAGTTCGG TCCAGGTTTC GTTGTGAGAC CGTTTGTTCC CGAAGAGTTG AAGGGGGCGG ACGCGGTCAC AGACTTTTTC GCCTCGGCTC TTGATACGCA AGATTTCTCC GTTGGCAGCA TGATGCGCGA GAACCAGACG GTGACTGCGA AAGCTCTAGC GGGGTTGCGT CATTTCAATC GCGAAGCCGC CTCGGCAGAT ATTCCTCCTG GCTATCGCAT TCCGTTGGCG AGAACCATCG CGAAGGGCAT CAGGACGGAT CCTGCAGCGG AGAAATTGGA AGTTGATAAG GCGAGTGTCG CGCTGATCTT GCAACAGTTC GCCGAAGACG CCAGGCTTCT GGATGCAGAG TTTTTCGGCC GCCCACTTTT CCTTCCGAAA CTTGAGGCTG CGGAACGTAA CGCTGGTGAA CGGCCTATCC GTCTGAAGAT TGATGATTAT TTTACTCCAC GCGAGCAGTC TCTCATCGCC GGGCATACTG CCTCAATTCT GGAGCTCATG CCGTCTTCTC AGGAGGACTG GATGCTTCAC TACCATGAGA ACAGGGCCCG GTACAACAGG GGGCTTCCGC CTGACGTGGA TGGGGGCGGT GAAATTCAGC AGCGTTTGCA GGAATTGATG GCGCTCTTCG GATAG
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Protein sequence | MQAFVSKIEQ RTVQHMPVNE KRQLVLHIGD PKTGTSSIQR ALQLGLVDGM CGKVSAFTTD NGSANAVSLA RSFNRKGRTR VKTEMQPVMK WLSSTTTPYA VISSEFFSNA DPSMVRRAFA RRYPALTSNI KVIAYARPHV GRTLAAYSER VKCGYTLSDF DQWLPVFMKS AFIRYHLRFK KWRDEFGPGF VVRPFVPEEL KGADAVTDFF ASALDTQDFS VGSMMRENQT VTAKALAGLR HFNREAASAD IPPGYRIPLA RTIAKGIRTD PAAEKLEVDK ASVALILQQF AEDARLLDAE FFGRPLFLPK LEAAERNAGE RPIRLKIDDY FTPREQSLIA GHTASILELM PSSQEDWMLH YHENRARYNR GLPPDVDGGG EIQQRLQELM ALFG
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