Gene Rsph17025_3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3999 
Symbol 
ID5086174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp25763 
End bp26947 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content54% 
IMG OID640485558 
Productnitroreductase 
Protein accessionYP_001170158 
Protein GI146280001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.483362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGCGT TCGTTTCAAA AATAGAGCAG AGGACTGTGC AACATATGCC TGTCAACGAG 
AAACGTCAGC TTGTTCTTCA TATCGGCGAC CCGAAGACGG GTACGTCATC CATTCAAAGA
GCGCTCCAGT TGGGACTGGT GGACGGCATG TGCGGGAAGG TGTCTGCCTT CACCACTGAT
AACGGGAGCG CGAACGCGGT GTCGTTGGCG AGAAGCTTCA ATCGAAAAGG TAGGACCCGG
GTCAAGACGG AAATGCAGCC GGTAATGAAG TGGCTCAGCA GCACGACCAC GCCTTATGCA
GTCATTTCTT CGGAATTCTT CTCGAATGCG GATCCCTCCA TGGTTCGCAG AGCCTTTGCC
AGAAGGTATC CGGCGCTTAC ATCTAATATC AAGGTCATAG CTTACGCCCG CCCGCATGTC
GGACGTACAC TCGCTGCCTA TTCCGAGCGC GTGAAATGTG GGTATACCTT GAGCGACTTC
GATCAATGGC TGCCTGTCTT CATGAAATCA GCCTTCATCC GCTATCATCT TCGTTTCAAG
AAGTGGCGAG ATGAGTTCGG TCCAGGTTTC GTTGTGAGAC CGTTTGTTCC CGAAGAGTTG
AAGGGGGCGG ACGCGGTCAC AGACTTTTTC GCCTCGGCTC TTGATACGCA AGATTTCTCC
GTTGGCAGCA TGATGCGCGA GAACCAGACG GTGACTGCGA AAGCTCTAGC GGGGTTGCGT
CATTTCAATC GCGAAGCCGC CTCGGCAGAT ATTCCTCCTG GCTATCGCAT TCCGTTGGCG
AGAACCATCG CGAAGGGCAT CAGGACGGAT CCTGCAGCGG AGAAATTGGA AGTTGATAAG
GCGAGTGTCG CGCTGATCTT GCAACAGTTC GCCGAAGACG CCAGGCTTCT GGATGCAGAG
TTTTTCGGCC GCCCACTTTT CCTTCCGAAA CTTGAGGCTG CGGAACGTAA CGCTGGTGAA
CGGCCTATCC GTCTGAAGAT TGATGATTAT TTTACTCCAC GCGAGCAGTC TCTCATCGCC
GGGCATACTG CCTCAATTCT GGAGCTCATG CCGTCTTCTC AGGAGGACTG GATGCTTCAC
TACCATGAGA ACAGGGCCCG GTACAACAGG GGGCTTCCGC CTGACGTGGA TGGGGGCGGT
GAAATTCAGC AGCGTTTGCA GGAATTGATG GCGCTCTTCG GATAG
 
Protein sequence
MQAFVSKIEQ RTVQHMPVNE KRQLVLHIGD PKTGTSSIQR ALQLGLVDGM CGKVSAFTTD 
NGSANAVSLA RSFNRKGRTR VKTEMQPVMK WLSSTTTPYA VISSEFFSNA DPSMVRRAFA
RRYPALTSNI KVIAYARPHV GRTLAAYSER VKCGYTLSDF DQWLPVFMKS AFIRYHLRFK
KWRDEFGPGF VVRPFVPEEL KGADAVTDFF ASALDTQDFS VGSMMRENQT VTAKALAGLR
HFNREAASAD IPPGYRIPLA RTIAKGIRTD PAAEKLEVDK ASVALILQQF AEDARLLDAE
FFGRPLFLPK LEAAERNAGE RPIRLKIDDY FTPREQSLIA GHTASILELM PSSQEDWMLH
YHENRARYNR GLPPDVDGGG EIQQRLQELM ALFG