| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3979 |
|---|
| Symbol | |
|---|
| ID | 5086154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009430 |
|---|
| Strand | - |
|---|
| Start bp | 6426 |
|---|
| End bp | 6833 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640485538 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170138 |
|---|
| Protein GI | 146279981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0267676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTCG GCACTCTCGT CCTGCGCTAC GGTTTCTTTG CGGTGCTGGC CACGCTGGCC
AATCTGGGCA CCCAGCGGCT GGTGCTGCTG GGCGGCGACG AGGCGCGCCT CTTCCTGCCG
GCGCTGGCGA TGGGCACGCT GGTCGGGCTG GTGGTGAAAT ATCTGCTCGA CAAGCAGTGG
ATCTTCTTCG ACCGCGCGGC GGGCCTCGGC GCGCATGGCC GCAAGTTCTC GCTCTACACG
CTGATGGGCG TGGCGACGAC GGCGATCTTC TGGGGCACCG AGACGCTTTT CTGGTGGATC
GGCGGAACCC ATGCCGCGCG CGAGACGGGC GCGGTGCTGG GTCTCGCCGT CGGTTATGTG
GTCAAGTACA ATTTGGACAA GCAGTATGTT TTCCGTCAGC TCGAATGA
|
|---|
| Protein sequence | MSLGTLVLRY GFFAVLATLA NLGTQRLVLL GGDEARLFLP ALAMGTLVGL VVKYLLDKQW
IFFDRAAGLG AHGRKFSLYT LMGVATTAIF WGTETLFWWI GGTHAARETG AVLGLAVGYV
VKYNLDKQYV FRQLE
|
|---|
| |