| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3978 |
|---|
| Symbol | |
|---|
| ID | 5086153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009430 |
|---|
| Strand | - |
|---|
| Start bp | 5285 |
|---|
| End bp | 6448 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640485537 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170137 |
|---|
| Protein GI | 146279980 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0578608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCCG TCAGCTCGAA TGAACTTTCC CGCGAACGCG GAGCCCTCAC CGGAAGGACG
TTCGCCACCC TCTGCCTTGC GATCTTCCTC TTCCTCAGCG CCTTCGTGGT GTGGAAGGCG
TGGCAGGCGG CCGACGGACA TCTGATCTTC ACGCTCGATG ATCCCTACCT CCATCTGGCC
GTGGCCGAGA CCCTGCTGCA GGGCGGCTAT GGGGTGAACT TCCCCCAGAC GTCCTCGCCC
TCCTCCTCGA TCCTCTACAC GCTTCTTCTG GCGCCGTTCG TCGCCCTCGG GGCCGGAGCG
GCGGGGGCGC TCGGCCTGTC GCTGACCGCG CAGGGGGCGG CCGTCTGGCT CGTCGCGCGG
CTGATCTGGG ATCATCTGCT CGAGGCCCTG CCCGAACGTC TGCGCCTTCC CGCCGGGTTG
GGCGCCGCCC TGCTGACGGG CCTTCTGGCC GTCTCTCCGG CGGTGTCCCG GCCCGGTCGA
CCGGTGGCGG CGGTGGCGAC TGCCGCCCCC GGGGCGCACC TTATTTTCGG GAAGTTCGGT
TGGCTCGGCC GCTATGAGCC CTATGCCGTG GCCCTTGCGC TCGTTGCGCT GACGGCGGCC
GGCGGGCGGG CCCTGTCCAC GCTTCGGCCC GTCTGGGCCG GGCCCACGGT GGCCCTTGCG
GTTCTGGGCG TGGTGGCGGT TTCCTTCCTT ACGCCGGCGA AGGACACGCC CGCCGCGTCC
CGCAACATTT TCGAACAGCA ATACCAGATG CACCGGTTCA CGACCGAGTT CTTTCCCCGG
ACGGTGGCGG TGAACGCTCT CGGCTGGGTC GCCTACCGGA ACGACGGCCA TGTGCTGGAT
CTCTGGGGGC TCGGCTCGGA GGAGGTGCGG CGCGCCACGC GCAGCGCCGG CGGCCTCACC
CCCGAACTCA TCGCAGAGCT TGCGGACCGG AAGGGCGCCG TCTACGCGAT GATCTACGAC
CGCTGGTTCA AGGGGCGGGT TCCCCCCTCC TGGTGCCGCA TGGCGGTCCT TCGGACGAGC
CTCGTCACCG CCGGCTCCGA CGAGGTCTCG TTCTACCTGA TCGACCCGGC CGAGGCACCT
GCGATGGCCG GGGCGCTGGC CCGTTTCGCC CCGACCCTGC CGGCCGGCGC CTCGTTGGAG
GTGATCCCAT GCCCGCGCCC GTGA
|
|---|
| Protein sequence | MFSVSSNELS RERGALTGRT FATLCLAIFL FLSAFVVWKA WQAADGHLIF TLDDPYLHLA
VAETLLQGGY GVNFPQTSSP SSSILYTLLL APFVALGAGA AGALGLSLTA QGAAVWLVAR
LIWDHLLEAL PERLRLPAGL GAALLTGLLA VSPAVSRPGR PVAAVATAAP GAHLIFGKFG
WLGRYEPYAV ALALVALTAA GGRALSTLRP VWAGPTVALA VLGVVAVSFL TPAKDTPAAS
RNIFEQQYQM HRFTTEFFPR TVAVNALGWV AYRNDGHVLD LWGLGSEEVR RATRSAGGLT
PELIAELADR KGAVYAMIYD RWFKGRVPPS WCRMAVLRTS LVTAGSDEVS FYLIDPAEAP
AMAGALARFA PTLPAGASLE VIPCPRP
|
|---|
| |