| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3976 |
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| Symbol | |
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| ID | 5086151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009430 |
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| Strand | - |
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| Start bp | 3238 |
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| End bp | 3975 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640485535 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001170135 |
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| Protein GI | 146279978 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00930617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAAAG ACCCGGTTCT CATCCTCGGC GCGGGCTCGG ACATCGCCCG GGCCATCGCC
CGCCGCCTGG CCGCCGACGG CCATCCGCTG CAGCTGGCGG CGCGGGACAC GGCCCGGCTG
GAGGCGGACC GCCGCGATCT CGAGCTGCGC CACGCCGTGG CGGTGACGCT GCACGAGTTC
GACGCCTGCG ATATCGCCGC CATCCCCGCC TTCCTCGATG GCTTGCCCGC CCTTCCGGGC
ATCGCCGTCT CGGCCGTGGG CCTTCTGGGC GCGCAGGCGG CCTCGGAACG CGATCCGGCG
GCGGCGCTGG CGGTCCTGCG GACGAATTTC GAGGGCCCCG CCATGGTATT CGCCGAACTG
GCCAACCGGA TGGAGGCGCG GGGGCGGGGC ACGCTGGTGG GCATCTCCTC GGTCGCCGGC
GACCGGGGAC GCGCCACGAA CTACATCTAC GGCGCGGCCA AGGCGGGCTA CACCGCCTTC
CTGTCCGGCC TGCGCAACCG GCTGGCCCGC AAGGGCGTGC AGGTGATCAC CGTCCTTCCA
GGCTTCGTGG CGACCCGGAT GACCGAGGGC ATGAACCTGC CCGCCCGGCT GACCGCGCAG
CCCGAGGAGG TCGCCGATGC CGTCGCCCGC GCGATCGCGC GCCGCCGGGA CGTGATCTAT
GTCCGCCCGG TCTGGCGCCT CATCATGGCC ATCATCCGCG CCCTGCCCGA GGCGCTGTTC
AAGAGGCTGA AACTGTGA
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| Protein sequence | MTKDPVLILG AGSDIARAIA RRLAADGHPL QLAARDTARL EADRRDLELR HAVAVTLHEF
DACDIAAIPA FLDGLPALPG IAVSAVGLLG AQAASERDPA AALAVLRTNF EGPAMVFAEL
ANRMEARGRG TLVGISSVAG DRGRATNYIY GAAKAGYTAF LSGLRNRLAR KGVQVITVLP
GFVATRMTEG MNLPARLTAQ PEEVADAVAR AIARRRDVIY VRPVWRLIMA IIRALPEALF
KRLKL
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