Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3973 |
Symbol | |
ID | 5086148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | - |
Start bp | 581 |
End bp | 1243 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640485532 |
Product | hypothetical protein |
Protein accession | YP_001170132 |
Protein GI | 146279975 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.208047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.570068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACGAGAC GCTGGCCGAC ACGGCCTTCT GGGCGACGAT CGGGCTGTCG GCGCTGGCCG GGGCCGCGGC CTTCGCGGCC CCCCCTTTAT GCGCAGCTCG TGGTCCAGGA GGAGGTGACG GCCGTCGTCC GCTGGCTGGC GGTCCTCCTA CCCTTCTCGG CGCTCGGCAC GATCCACGCC GCCCGCCTCG CGTGCGACTT CCGCCAGAAG AGCCTCGCGC TGCAGTCCAT GCCGCGAGCC TTGCTCGGGC AGCGCCGCCA TCGCCGCGGC CTAGGCCGGC TGGGGCATCT GAGCGCTGGT GGTGCAGTCG GCCGTTTCCT CGGCGGTGAC GGTCTCGCTC ACCTGGAAGA GCCTGCGCTG GCGGCCGGGC TCTGGCTTCC GCTGGTCCGG CTCAGGGGCA TCCTCCGCTT CAGCGCCAGC ATGGTGGCAA CGCAGCTTCT GTGGATGCTG CTCGTCCGGG TGCAGGACCT GTTCCTCGCC CGCTGGCACG GGGCCGAGGC GGTGGGCACC TACCGCGTCG CCTGGCGGCT GATCGAGCTG ATCGGCCAGT CGGTGCTGGC GCCCGCCCTC TCGATCGTCA TCTGCGCCCG CAACCGTGAC CACCGGCTCA TGCTCGCAGC ACTGGCCGCG ATCCGAAGCG GTGGCCTTGG AAGGTGCTGG TGA
|
Protein sequence | MTRRWPTRPS GRRSGCRRWP GPRPSRPPLY AQLVVQEEVT AVVRWLAVLL PFSALGTIHA ARLACDFRQK SLALQSMPRA LLGQRRHRRG LGRLGHLSAG GAVGRFLGGD GLAHLEEPAL AAGLWLPLVR LRGILRFSAS MVATQLLWML LVRVQDLFLA RWHGAEAVGT YRVAWRLIEL IGQSVLAPAL SIVICARNRD HRLMLAALAA IRSGGLGRCW
|
| |