Gene Rsph17025_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3973 
Symbol 
ID5086148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp581 
End bp1243 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content71% 
IMG OID640485532 
Producthypothetical protein 
Protein accessionYP_001170132 
Protein GI146279975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.208047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.570068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGAGAC GCTGGCCGAC ACGGCCTTCT GGGCGACGAT CGGGCTGTCG GCGCTGGCCG 
GGGCCGCGGC CTTCGCGGCC CCCCCTTTAT GCGCAGCTCG TGGTCCAGGA GGAGGTGACG
GCCGTCGTCC GCTGGCTGGC GGTCCTCCTA CCCTTCTCGG CGCTCGGCAC GATCCACGCC
GCCCGCCTCG CGTGCGACTT CCGCCAGAAG AGCCTCGCGC TGCAGTCCAT GCCGCGAGCC
TTGCTCGGGC AGCGCCGCCA TCGCCGCGGC CTAGGCCGGC TGGGGCATCT GAGCGCTGGT
GGTGCAGTCG GCCGTTTCCT CGGCGGTGAC GGTCTCGCTC ACCTGGAAGA GCCTGCGCTG
GCGGCCGGGC TCTGGCTTCC GCTGGTCCGG CTCAGGGGCA TCCTCCGCTT CAGCGCCAGC
ATGGTGGCAA CGCAGCTTCT GTGGATGCTG CTCGTCCGGG TGCAGGACCT GTTCCTCGCC
CGCTGGCACG GGGCCGAGGC GGTGGGCACC TACCGCGTCG CCTGGCGGCT GATCGAGCTG
ATCGGCCAGT CGGTGCTGGC GCCCGCCCTC TCGATCGTCA TCTGCGCCCG CAACCGTGAC
CACCGGCTCA TGCTCGCAGC ACTGGCCGCG ATCCGAAGCG GTGGCCTTGG AAGGTGCTGG
TGA
 
Protein sequence
MTRRWPTRPS GRRSGCRRWP GPRPSRPPLY AQLVVQEEVT AVVRWLAVLL PFSALGTIHA 
ARLACDFRQK SLALQSMPRA LLGQRRHRRG LGRLGHLSAG GAVGRFLGGD GLAHLEEPAL
AAGLWLPLVR LRGILRFSAS MVATQLLWML LVRVQDLFLA RWHGAEAVGT YRVAWRLIEL
IGQSVLAPAL SIVICARNRD HRLMLAALAA IRSGGLGRCW