| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3949 |
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| Symbol | dnaE |
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| ID | 5086124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 853012 |
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| End bp | 856503 |
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| Gene Length | 3492 bp |
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| Protein Length | 1163 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640485507 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001170108 |
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| Protein GI | 146279950 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0040384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.125075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACG CCCCCCGATT CATCCACCTC CGCGTCCATA CCGAATATTC GCTGCTGGAA
GGCGCGGTGC CGGTCAAGAA GCTGATCGGC CTGTGCACCG CGGCTGCCAT GCCGGCGGTG
GCGGTGACGG ACACCAACGC CATGTTCGCC GCGCTGGAAT TCTCGGTGCT GGCAAGCGGC
GCCGGGATCC AGCCCATTGT CGGCTGTCAG GTCTCGGTCG CCTACGAGAC GGCGGCGCTC
GGCGAGCGGG CGAAGCCGCC CGCGCCGGTC GTGCTGCTGG CGCAGAACGA AGCGGGTTAC
GGCAACCTGA TGAAGCTCTC CTCCTGCCTC TATCTCGGCA AGGAGGGGGC GCTGCCGCAG
GTGACGCTGG AGGAGCTGGA GCGGCATGCG AGCGGGCTGA TCTGCCTCAC CGGCGGGCCG
GACGGGCCGG TGGGCCGGCA TCTGCGGGAA GGGCAGCGGG CGAAGGCCGA GGCGCTGCTG
GGCCGCCTCG CCGCGATCTA TCCGGGGCGG CTCTATGTCG AGTTGCAGCG CCATCCGGGC
GAGGGCGGGC GGCTGACCGA GGCCGAGCGT GCGACCGAGC CCGGGCATGT GGAGCTCGCT
TATGCGATGG GCCTGCCGCT GGTGGCCACC AACGACGTCT ATTTTCCGAA GCCCGAGATG
TATGAGGCGC ATGACGCGCT GATCTGCATC GCCGAGGGGG CCTATGTCGA TCAGGTGGCG
CCGCGGCGGC GGCTGACGCC GCAGCATTAC TTCAAGTCCG AGGCCGAGAT GGTCGCGCTC
TTCGCCGACC TGCCCGAAGC GGTGGAGAAC ACCGTCGAGA TCGCGCGCCG CTGCGCGTTC
AAGGCCGCAA AGCGACCGCC GATCCTGCCG CGCTTCGCCG ACGACGAGGT GGAGGAGCTG
CGGCGGCAGG CGAAGGGTGG GTTGGCCGCC CGCCTCGCCG TGATCCCCCA TGCGGCGCCG
GTCGAGGACT ACGAGGCGCG CCTCGCCTTC GAGCTTGGCA TCATCGAGCA GATGGGCTTT
CCGGGCTACT TCCTGATCGT GGCCGACTTC ATCAAGTGGG GGAAGGCCAA CGGCATTCCC
GTGGGGCCCG GACGGGGGTC GGGCGCGGGC AGCCTCGTGG CCTACGCGCT GACGATTACC
GACCTGGATC CATTGCGTTA CCAGCTTCTC TTCGAGCGGT TTCTGAACCC CGAGCGGGTC
TCGATGCCGG ACTTCGACAT CGACTTCTGC ATGGACCGGC GCGAGGAGGT CATCCGCTAC
GTCCAGGAGA AGTACGGCCG CGACAAGGTG GGGCAGATCA TCACCTTCGG CGCGCTCCTC
TCGAAGGCCG CCGTCCGCGA CGTGGGGCGT GTGCTGCAGA TGCCCTACGG GCAGGTGGAC
CGGCTGTCGA AGATGATCCC GGTCGAGGGG GTGAAGCCCG TCTCGATCCA GAAGGCGCTG
GCCGACGAGC CGCGGCTGCG CGAGGCCGCA AAGACCGAGG AGGTGGTCAA GCGGCTGCTC
GACTACGGGA TGCAGGTCGA GGGGCTTCTG CGCAACGCCT CGACCCATGC CGCGGGCGTG
GTGATCGGCG ACCGGCCGCT CGACGAGCTG GTGCCGCTCT ATCAGGACCC GCGCTCGGAC
ATGCCGGCTA CCCAGTTCAA CATGAAATGG GTCGAGGCCG CGGGGCTGGT GAAGTTCGAC
TTCCTGGGCC TCAAGACGCT GACGGTGATC CAGAACGCGA TCGACCTGAT CCGCGGCACG
GGGCGGCCCC TGCACATGGC GGCGGACGGG CGGGTGCTCT ACGACCCGCC GCCGGGGGCC
GAGAACGACA TCGGGCACAT TCCGCTCGAG GACAAGGCCG CCTACGAGCT TTACGCCCAG
GCCAAGACCG TCGCGGTGTT CCAGGTCGAA AGCTCGGGCA TGATGGATGC GCTGCGGCGC
ATGAAGCCCA CCTGCATCGA GGATATCGTC GCGCTGGTCG CGCTCTACCG TCCGGGGCCG
ATGGAGAACA TCCCGGTCTA TTGCGAGGTG AAGCACGGGC TGCGCGAGCT GGAGAGCCTG
CATCCGACCA TCGACCCGAT CCTGAAGGAG ACGCAGGGCA TCATCGTCTA TCAGGAACAG
GTGATGCAGA TCGCGCAGGT CATGGCGGGC TATACGCTGG GCGGCGCGGA CCTGTTGCGC
CGCGCCATGG GCAAGAAGAT CGCCGAGGAG ATGGCGAAGG AGCGCCCGAA GTTCATCGAG
GGAGCGAAGA AGACCCACGG GATCGACACG AAGAAAGCGG GCGAAGTCTT CGACCTGCTG
GAGAAATTCG CGAACTACGG CTTCAACAAG TCGCACGCCG CGGCCTATGC GGTCGTGAGC
TACCAGACCG CCTGGCTGAA GGCCAACCAT CCGGTCGAAT TCATGGCCGC GGTTATGAAC
TGCGATATCC ACCTGACGGA CAAGCTCGCC GTCTACAAGC GCGAGGTGGA CAAGCTCGGC
ATCCGCACCG TGGCGCCCTG CGTGAATGCC TCGCTCGCCA CCTTCACGGT GCGCGACGGG
GCGGTGGTCT ATGCGCTCGG CGCGCTGAAG AACGTGGGCG TCGAGGCGAT GCGGCTCATC
GTCGAGGCCC GCGGCGACAG GCCCTTCGCC ACGCTCTTCG ACATGGCGCG GCGGGTCGAG
CTGAAGAAGA TCGGCAAGCG CCCGCTCGAG ATGCTGGCGC GCGCCGGGGC CTTCGACGCG
CTCGACCGCA ACCGCGCGCG GGTGTTCGAG GCGCTGGACG CGCTGGTTTC CTATTCCGCC
GCCATTCACG AAGCGCGAAA TTCAAGCCAG GTCTCGCTCT TCGGCGAGGC GGGGGCGGAC
ATTCCCGAGC CGCGGCTTCC GTCCCGCGAC GACTGGCTGC CGGTCGAGCG GCTGGCGCAG
GAGCATCAGG CCATCGGCTT CTATCTTTCG GGCCATCCGC TCGACGATTA CATGGGGGCG
TTGAAGCGGC GGAACGTGAC CACACTCGCG GCGCTGACCG ATCTGGCGCA GCGGGGGCCG
ATGGTGGCCA AGCTTGCGGG GGCCGTCTCG TCGCGGCAGG AGAAGAAGTC GGCCAAGGGC
AACCGCTTTG CCTTCGTCCA GCTCTCGGAC CCGACCGGGC TTTACGAATG CACCGTCTTC
TCGGATGTGC TGGAGCAGGC GCGCGACCTG CTGGAACCGG GCGGCCATGT GGTGCTGACG
GTCGAGGCCA CGCTCGAGGG CGACAGCCTG AAGCTGCTCG CCCGTGGGGT CGCGCCCATT
GATGCGGTGG CGGCCGATGC GGGCGCGATG AGCCTGCGTG TCCATCTCGA CCGCGCCGAG
GCCGCGGCCT CGGTGGCGGC GCTGCTCGCC CGCGCGCAGG GCCGCGCCCG GGCGCCGGTG
CGGATCTGCG TGCGCGACCC CTCGGGCGGG CAGGAGATCG ACATCGAGCT GGGTCAGGAT
TTTGCCGTCT CGCCCCAGAT CCGCAGCGCG CTTCGCGCCG TTCCGGGCGT CGAGATGGTC
GAGGAGATCT GA
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| Protein sequence | MSNAPRFIHL RVHTEYSLLE GAVPVKKLIG LCTAAAMPAV AVTDTNAMFA ALEFSVLASG
AGIQPIVGCQ VSVAYETAAL GERAKPPAPV VLLAQNEAGY GNLMKLSSCL YLGKEGALPQ
VTLEELERHA SGLICLTGGP DGPVGRHLRE GQRAKAEALL GRLAAIYPGR LYVELQRHPG
EGGRLTEAER ATEPGHVELA YAMGLPLVAT NDVYFPKPEM YEAHDALICI AEGAYVDQVA
PRRRLTPQHY FKSEAEMVAL FADLPEAVEN TVEIARRCAF KAAKRPPILP RFADDEVEEL
RRQAKGGLAA RLAVIPHAAP VEDYEARLAF ELGIIEQMGF PGYFLIVADF IKWGKANGIP
VGPGRGSGAG SLVAYALTIT DLDPLRYQLL FERFLNPERV SMPDFDIDFC MDRREEVIRY
VQEKYGRDKV GQIITFGALL SKAAVRDVGR VLQMPYGQVD RLSKMIPVEG VKPVSIQKAL
ADEPRLREAA KTEEVVKRLL DYGMQVEGLL RNASTHAAGV VIGDRPLDEL VPLYQDPRSD
MPATQFNMKW VEAAGLVKFD FLGLKTLTVI QNAIDLIRGT GRPLHMAADG RVLYDPPPGA
ENDIGHIPLE DKAAYELYAQ AKTVAVFQVE SSGMMDALRR MKPTCIEDIV ALVALYRPGP
MENIPVYCEV KHGLRELESL HPTIDPILKE TQGIIVYQEQ VMQIAQVMAG YTLGGADLLR
RAMGKKIAEE MAKERPKFIE GAKKTHGIDT KKAGEVFDLL EKFANYGFNK SHAAAYAVVS
YQTAWLKANH PVEFMAAVMN CDIHLTDKLA VYKREVDKLG IRTVAPCVNA SLATFTVRDG
AVVYALGALK NVGVEAMRLI VEARGDRPFA TLFDMARRVE LKKIGKRPLE MLARAGAFDA
LDRNRARVFE ALDALVSYSA AIHEARNSSQ VSLFGEAGAD IPEPRLPSRD DWLPVERLAQ
EHQAIGFYLS GHPLDDYMGA LKRRNVTTLA ALTDLAQRGP MVAKLAGAVS SRQEKKSAKG
NRFAFVQLSD PTGLYECTVF SDVLEQARDL LEPGGHVVLT VEATLEGDSL KLLARGVAPI
DAVAADAGAM SLRVHLDRAE AAASVAALLA RAQGRARAPV RICVRDPSGG QEIDIELGQD
FAVSPQIRSA LRAVPGVEMV EEI
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