Gene Rsph17025_3945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3945 
Symbol 
ID5086120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp846436 
End bp847956 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content70% 
IMG OID640485503 
Producthypothetical protein 
Protein accessionYP_001170104 
Protein GI146279946 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.136005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.317773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAC TTCTGCGGAT CGAGGGGGTG ACCAAGGCCT ATCCGGGCGT GGTCGCGAAC 
TCGGACGTGT CCTTCTCGAT CCGGGAAGGC GAGGTGCATG CGCTCCTCGG CGAGAACGGC
GCGGGCAAGT CCACGCTGGT CAAGATGATC TACGGGCTGG TCCGGCCCGA CGAGGGGCGG
ATGCGGCTGC GCGGGCAGAA CTATGCCCCG CGCGAGCCGC GCGAGGCGCG CGCTGCGGGC
GTGGCCATGG TGTTCCAGCA TTTCAGCCTG TTCGAGGCGC TGAACGTGGC CGAGAACGTG
GCGCTCGGGA TGGAGAACCC GCCGAGGCTG CGTGATCTCG CCGCGCGCAT CCGGCAGGTC
TCGGAGGAAT ATGGCCTGCC CCTCGATCCG TCGCGCATGG TGGGCGACCT CTCGGCCGGC
GAGCGGCAGC GGGTCGAGAT CGTGCGCTGC CTGCTGCAGG ATCCGAAACT GCTCATCATG
GACGAGCCGA CCTCGGTCCT CACCCCGCAG GAGGTGGAGA TCCTGTTCCA GACCCTGCGC
CAGCTGGCGG CCGAGGGGAC CTCGATCCTC TACATCAGCC ACAAGCTCGA GGAGATCCGG
GCGCTCTGCG ACGAGGCGAC GATCCTGCGC CGCGGCAAGG TGGTGGCGAC CTGCATCCCG
CGCGAACGCT CGGCCCGCGA GATGGCCGAA CTGATGGTGG GCACCGTCCT GACCCCGCCC
GAGCGGCACG CGACCCCCAA GGGCGAAGTG GCGCTCGAGG TGGCGGGACT GTCGGTCGCC
TCGCCGATCC CCTTCGGCAC CGCGCTCAAG GACATCAGCT TCAAGGTTCG CCGCGGCGAG
GTGCTGGGCA TTGCGGGCGT GGCGGGCAAC GGGCAGGACG AACTGCTGAT CGCGCTCTCG
GGCGAGCTGC GCGCGCCGAA GGATGCGGTG CTGGTCGAGG GGCACGGCGT GGGCGACCTC
GGGCCGAACG AGCGCCGCAC GCGGGGGCTG GTGGCCGCGC CCGAAGAGCG GCTGGGCCAT
GCGGCCGCGC CCGACATGAG CCTTGTGGAG AACGCGCTCC TGTCGGGGGT GGTGCGCAAG
CGGCTGACAT GGCGCGGCTT CATCGACTGG GCGGGCACGC GCGCCTTCGC CTCCGAGATC
GTCGAGCGGT TCGACGTGCG CACGCCCGGC ACATGGGTGA CCGCGCGGGC GCTTTCGGGC
GGCAACCTGC AGAAGTTCGT GGTGGGCCGC GAGCTGTCGC AGGATCCGTC GGTCATCATC
ATCAACCAGC CGACGTGGGG CGTGGACGCC TCGGCCGCGG CGGCGATCCG GCAGGCGATC
CTCGACCGGG CGGCGGCGGG GGCGGCGGTC GTGGTCATCA GTCAGGACCT TGACGAGCTT
CTGGAAATCG CCGATCGCTT CGCGGCCCTG AACGAGGGTC GGCTCAGCGT GCCCCGGCCG
ACGCAGGGCC TGTCCATCGA GGAGATCGGC CTGATGATGG GCGGCGCGCA CGGGATGGAG
GTGGCCCATG CTCACGCTTG A
 
Protein sequence
MTELLRIEGV TKAYPGVVAN SDVSFSIREG EVHALLGENG AGKSTLVKMI YGLVRPDEGR 
MRLRGQNYAP REPREARAAG VAMVFQHFSL FEALNVAENV ALGMENPPRL RDLAARIRQV
SEEYGLPLDP SRMVGDLSAG ERQRVEIVRC LLQDPKLLIM DEPTSVLTPQ EVEILFQTLR
QLAAEGTSIL YISHKLEEIR ALCDEATILR RGKVVATCIP RERSAREMAE LMVGTVLTPP
ERHATPKGEV ALEVAGLSVA SPIPFGTALK DISFKVRRGE VLGIAGVAGN GQDELLIALS
GELRAPKDAV LVEGHGVGDL GPNERRTRGL VAAPEERLGH AAAPDMSLVE NALLSGVVRK
RLTWRGFIDW AGTRAFASEI VERFDVRTPG TWVTARALSG GNLQKFVVGR ELSQDPSVII
INQPTWGVDA SAAAAIRQAI LDRAAAGAAV VVISQDLDEL LEIADRFAAL NEGRLSVPRP
TQGLSIEEIG LMMGGAHGME VAHAHA