Gene Rsph17025_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3939 
Symbol 
ID5086114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp840506 
End bp841267 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content73% 
IMG OID640485497 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001170098 
Protein GI146279940 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.741834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTGA GGGATCAGGC AGCACTGGTC ACCGGCGCCG GGTCGGGTCT GGGCGAGGCC 
ACCGCGCGGG CGCTGGCGGC GGCGGGGGCG CGGGTTGCGC TGCTGGATTT CAACCTGTCG
GCGGCCGAGG CCGTGGCGGC CGACATTGGC GGGCTGGCCC TCGCCTGCGA CGTCGCTTCG
GCCGAGAGCG CCGAAGAGGC GGTGGAAAGG GCCGCGGCCG CGCATGGTGC GGCCCGCATC
CTGGTCAATT GCGCGGGCGT GGCCCCGGCG AGGAAGATGC TGGGCAAGGG CGGCACGATG
CCGCTCGACG ACTTCCGGCG CACCATTGAG GTGAACCTGA TCGGCAGCTT CAACCTTCTG
CGGCTCTTTG CGGCGGGCGC GGCCGGGCTG GCTCCGCTCG ACACGGCCGA GCGGGGCGTG
GCGATCAACA CGGCCTCCAT CGCGGCATGG GAGGGGCAGA TCGGCCAGAC GGCCTATGCG
GCTTCCAAGG GCGGGATCGT GGGTCTCACC CTGCCCGCCG CGCGCGAGCT GGCGCCGCTC
GGCATCCGGG TGTGCGCGAT CGCCCCCGGC ATCTTCGAGA CCGCCATGCT CAAGGGCCTG
CCCGAGGCCG CGCAGGAAAG CCTCGGCGCC GCGGTGCCCT TCCCCTCGCG CCTTGGCCGC
CCCGCCGAGT TCGCGGCGCT GGCGCTGCAT ATCCTCACCA ACCCGATGCT GAATGGCGAG
ACAATCCGCC TCGACGGGGC GCTCAGGATG GGGCCGAAGT AG
 
Protein sequence
MDVRDQAALV TGAGSGLGEA TARALAAAGA RVALLDFNLS AAEAVAADIG GLALACDVAS 
AESAEEAVER AAAAHGAARI LVNCAGVAPA RKMLGKGGTM PLDDFRRTIE VNLIGSFNLL
RLFAAGAAGL APLDTAERGV AINTASIAAW EGQIGQTAYA ASKGGIVGLT LPAARELAPL
GIRVCAIAPG IFETAMLKGL PEAAQESLGA AVPFPSRLGR PAEFAALALH ILTNPMLNGE
TIRLDGALRM GPK