Gene Rsph17025_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3938 
Symbol 
ID5086113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp839608 
End bp840438 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content67% 
IMG OID640485496 
Producthypothetical protein 
Protein accessionYP_001170097 
Protein GI146279939 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.475326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGACC ACAGGGGGCA GTTCATGCTG ATACGTTTCG GATACGAGAT CTCGGTGAAC 
TGCGCCGAGG ACACGCCGAT GAACTGCCTG CTCGACATCC GGGACGAGCA TCGCCCACAG
CTCCGCTCGG CCGAGGTGGT CACGACCGAG CCGGAGGTTC CGATGGCGCT CCACCGGGAC
ATGTTCGGCA ACATCTGCCG ACGGCTTGTG GTGCCTGCGG GCGATTTAAC CATCCGCGGC
GACGGTGTGA TCGAGGATCC CGGCCATCCC GATCCCGAAG ACCTGACGGC TGAGGAGGTG
CCCGTCGCCC GCCTGCCCGA CGAGACGCTG CCGTTTCTGC TCGGATCGCG TTACTGCGAG
ACGGACCGGA TCAGCCAGAT CGCCTGGGAC CTGTTCGGCG GGCTGGCTCC GGGCTGGGGG
CGGGTCCAGG CGATCTCGGA CTTTGCGCAC CGCCACATCC GTTTCGATTA TGCCAACGCC
AGCTCGACCC GCACCGCCTA TGAGGCGTGG GAGGACGGCA CCGGCGTCTG CCGCGACTTC
ACCCACCTTG CGATCGCGCT CTGCCGGGCC CTGAACATCC CGGCGCGCTA CGTCAATGGC
TACCTCGGCG ACATCGGCGT GCCGCCCGGC GGGCCGATGG ACTTCTGCGC CTGGATGGAG
GTCTATCTCG GCGGCCGCTG GCACACCTTC GATCCGCGCA ACAACCAGCG CAGGATCGGC
CGGATCACCG TCGCCCGAGG CCGTGACGCG GCCGATGTCG CGCTGATCCA CTCGTTCGGC
CCGCACACGC TGACGCACTT CTTCGTCCGC TGCGAAGAGC TGGAGGGCTG A
 
Protein sequence
MRDHRGQFML IRFGYEISVN CAEDTPMNCL LDIRDEHRPQ LRSAEVVTTE PEVPMALHRD 
MFGNICRRLV VPAGDLTIRG DGVIEDPGHP DPEDLTAEEV PVARLPDETL PFLLGSRYCE
TDRISQIAWD LFGGLAPGWG RVQAISDFAH RHIRFDYANA SSTRTAYEAW EDGTGVCRDF
THLAIALCRA LNIPARYVNG YLGDIGVPPG GPMDFCAWME VYLGGRWHTF DPRNNQRRIG
RITVARGRDA ADVALIHSFG PHTLTHFFVR CEELEG