Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3938 |
Symbol | |
ID | 5086113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 839608 |
End bp | 840438 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640485496 |
Product | hypothetical protein |
Protein accession | YP_001170097 |
Protein GI | 146279939 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.475326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGACC ACAGGGGGCA GTTCATGCTG ATACGTTTCG GATACGAGAT CTCGGTGAAC TGCGCCGAGG ACACGCCGAT GAACTGCCTG CTCGACATCC GGGACGAGCA TCGCCCACAG CTCCGCTCGG CCGAGGTGGT CACGACCGAG CCGGAGGTTC CGATGGCGCT CCACCGGGAC ATGTTCGGCA ACATCTGCCG ACGGCTTGTG GTGCCTGCGG GCGATTTAAC CATCCGCGGC GACGGTGTGA TCGAGGATCC CGGCCATCCC GATCCCGAAG ACCTGACGGC TGAGGAGGTG CCCGTCGCCC GCCTGCCCGA CGAGACGCTG CCGTTTCTGC TCGGATCGCG TTACTGCGAG ACGGACCGGA TCAGCCAGAT CGCCTGGGAC CTGTTCGGCG GGCTGGCTCC GGGCTGGGGG CGGGTCCAGG CGATCTCGGA CTTTGCGCAC CGCCACATCC GTTTCGATTA TGCCAACGCC AGCTCGACCC GCACCGCCTA TGAGGCGTGG GAGGACGGCA CCGGCGTCTG CCGCGACTTC ACCCACCTTG CGATCGCGCT CTGCCGGGCC CTGAACATCC CGGCGCGCTA CGTCAATGGC TACCTCGGCG ACATCGGCGT GCCGCCCGGC GGGCCGATGG ACTTCTGCGC CTGGATGGAG GTCTATCTCG GCGGCCGCTG GCACACCTTC GATCCGCGCA ACAACCAGCG CAGGATCGGC CGGATCACCG TCGCCCGAGG CCGTGACGCG GCCGATGTCG CGCTGATCCA CTCGTTCGGC CCGCACACGC TGACGCACTT CTTCGTCCGC TGCGAAGAGC TGGAGGGCTG A
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Protein sequence | MRDHRGQFML IRFGYEISVN CAEDTPMNCL LDIRDEHRPQ LRSAEVVTTE PEVPMALHRD MFGNICRRLV VPAGDLTIRG DGVIEDPGHP DPEDLTAEEV PVARLPDETL PFLLGSRYCE TDRISQIAWD LFGGLAPGWG RVQAISDFAH RHIRFDYANA SSTRTAYEAW EDGTGVCRDF THLAIALCRA LNIPARYVNG YLGDIGVPPG GPMDFCAWME VYLGGRWHTF DPRNNQRRIG RITVARGRDA ADVALIHSFG PHTLTHFFVR CEELEG
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