Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3936 |
Symbol | |
ID | 5086111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 838408 |
End bp | 838920 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640485494 |
Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
Protein accession | YP_001170095 |
Protein GI | 146279937 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.202589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.683728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGCGG ACTATCCGAC GAGCTTCGAC AAGGAGGCGC TGCTGGCTTG CGCGCGGGGC GAACTCTTCG GGCCGGGCAA TGCCCAGCTG CCGCTGCCGC CGATGCTGAT GATGGACCGC ATCACCGAGA TTTCGGCGGA TGGCGGACTT CACGGCAAGG GTCATGTGGT GGCCGAGTTC GACATCCACC CGGACCTGTG GTTCTTCGGG TGCCACTTTC CGGGCAACCC GGTCATGCCC GGCTGCCTCG GGCTGGACGG CCTGTGGCAA CTGACCGGCT TCAACCTCGG CTGGCGCGGC TGGCAGGGCC AGGGCTTTGC GCTCGGCGTG GGTGAGGTGA AGCTGCAGGG CATGGTCCGG CCGGATCGCA AGCTCGTCAC CTATCACGTC GATTTCACCC GCGTGATCGA CCGCCGGCTC AAGATGGGCG TGGCGGACGG CCGCGTCTTC GCCGACGGCG AGGAAATCTA TACCGTCAAG GACATGAAAG TCGGTCTGGC CGCTGCTGCC TGA
|
Protein sequence | MMADYPTSFD KEALLACARG ELFGPGNAQL PLPPMLMMDR ITEISADGGL HGKGHVVAEF DIHPDLWFFG CHFPGNPVMP GCLGLDGLWQ LTGFNLGWRG WQGQGFALGV GEVKLQGMVR PDRKLVTYHV DFTRVIDRRL KMGVADGRVF ADGEEIYTVK DMKVGLAAAA
|
| |