Gene Rsph17025_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3936 
Symbol 
ID5086111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp838408 
End bp838920 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID640485494 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_001170095 
Protein GI146279937 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.202589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.683728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGG ACTATCCGAC GAGCTTCGAC AAGGAGGCGC TGCTGGCTTG CGCGCGGGGC 
GAACTCTTCG GGCCGGGCAA TGCCCAGCTG CCGCTGCCGC CGATGCTGAT GATGGACCGC
ATCACCGAGA TTTCGGCGGA TGGCGGACTT CACGGCAAGG GTCATGTGGT GGCCGAGTTC
GACATCCACC CGGACCTGTG GTTCTTCGGG TGCCACTTTC CGGGCAACCC GGTCATGCCC
GGCTGCCTCG GGCTGGACGG CCTGTGGCAA CTGACCGGCT TCAACCTCGG CTGGCGCGGC
TGGCAGGGCC AGGGCTTTGC GCTCGGCGTG GGTGAGGTGA AGCTGCAGGG CATGGTCCGG
CCGGATCGCA AGCTCGTCAC CTATCACGTC GATTTCACCC GCGTGATCGA CCGCCGGCTC
AAGATGGGCG TGGCGGACGG CCGCGTCTTC GCCGACGGCG AGGAAATCTA TACCGTCAAG
GACATGAAAG TCGGTCTGGC CGCTGCTGCC TGA
 
Protein sequence
MMADYPTSFD KEALLACARG ELFGPGNAQL PLPPMLMMDR ITEISADGGL HGKGHVVAEF 
DIHPDLWFFG CHFPGNPVMP GCLGLDGLWQ LTGFNLGWRG WQGQGFALGV GEVKLQGMVR
PDRKLVTYHV DFTRVIDRRL KMGVADGRVF ADGEEIYTVK DMKVGLAAAA