Gene Rsph17025_3933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3933 
Symbol 
ID5086108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp835851 
End bp836276 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content68% 
IMG OID640485491 
Producthypothetical protein 
Protein accessionYP_001170092 
Protein GI146279934 
COG category[R] General function prediction only 
COG ID[COG3607] Predicted lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00670375 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.940576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGT CGATCTTCCT CAACCTGCCC GTGTCCGATC TCGCGCGGTC CATCCCGTTC 
TACCAGTCGC TCGGGTTCGG CCTGGACGCG CAGTTCTCGG ATGACACCGC GGCCTGCATC
ACGGTCTCCG ACACGATCCG CTTCATGCTG CTGACGCACG AGCGGTTCGA GGGATTCTGC
ACCCTGCCCC GCGCGGACAC GAGCGCAAGC ACGGCCGTCC TCATCGCGCT GTCGCGCGAC
AGCCGCGACG CGGTGGACGA CCTTCTGGCC GCCGCGCTCT CGGCCGGCGG GAAAGAGCCG
AAGCCCGCCG ACGATCACGG ATGGATGTAT CAGCGCACGG TCATGGACCC GGACGGCAAC
ACGCTCGAGA TCTTCTGGAT GGACGCCGAG GCGGCGTCGG CCGCGCGCAA GATGAACAGC
GGCTGA
 
Protein sequence
MPQSIFLNLP VSDLARSIPF YQSLGFGLDA QFSDDTAACI TVSDTIRFML LTHERFEGFC 
TLPRADTSAS TAVLIALSRD SRDAVDDLLA AALSAGGKEP KPADDHGWMY QRTVMDPDGN
TLEIFWMDAE AASAARKMNS G