Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3915 |
Symbol | |
ID | 5085463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 817085 |
End bp | 817942 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640485473 |
Product | secreted protein-like protein |
Protein accession | YP_001170074 |
Protein GI | 146279916 |
COG category | [C] Energy production and conversion |
COG ID | [COG3258] Cytochrome c |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.536069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC GCCCGCGCAG CCCGCTTCTT GCCGCCATCC TTGCCCTCGC CACCGGGCCG GCGCTGGCGG ACCCGCATCC CGACGCCGAG CTTGTCATCA ACGACGAGAT CGAGCTTGCG ACACGCGCCC CGGCGCCCGA CCACCTGAAG GAGGTGTTCG ACACCGTCTA TTCCGGCTGG CTGTTTCGCA CCGACGAGAC CCGCGCGCTG GAGATGGACG ACTTCGACAA CCCGGCGATG GTCTTCGCCG ACATGGGGGT GGACCTCTGG AACGCCGCGG ACGGCAGCGA GGGCAAGTCC TGCGCCTCGT GCCATGAAGG GATCGAGAGC ATGAAGGGCG TGCGCGCCTC GATGCCGAAG ATCAATCCCG CCGGCAACGA CATCTGGTCG GTCGAGAATT TCGTCAACAC CTGCCGGACC GACCGCATGG GCGCCGAAGC GTGGAAGTGG AACTCGCCCC AGATGAAGCA GATGACCTCG GCCATCTCGC TCCAGTCGCG AGGGATGCCG ATCTCGGTCA AGATCGACGG CCCCGCCGAA CCCTACTGGG AGCAGGGCAA GGAGATCTAC TACACCCGCT ATGGCCAGCT CGAACTGGCC TGCGCCTCGT GTCATGAGGT CAACATGGGC AAGATGATCC GGGCCGACCA CCTCAGCCAG GGCCAGATCA ACGGCTTCCC GACCTACCGG CTGGCCGATG CGGGGATCGT CTCGATCCAC CAGCGCTTCT CGGGCTGCAT CCGCGACACC CGCGGCGAGC CCTTCGAGGC GGGCTCGCCC GAGTTCCGCG CGCTGGAGCT TTACGTCGCC TCGCGCGGCA TGACGCTTCC CGTCGAGGGT CTGGCGGTCC GCCAGTAA
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Protein sequence | MSLRPRSPLL AAILALATGP ALADPHPDAE LVINDEIELA TRAPAPDHLK EVFDTVYSGW LFRTDETRAL EMDDFDNPAM VFADMGVDLW NAADGSEGKS CASCHEGIES MKGVRASMPK INPAGNDIWS VENFVNTCRT DRMGAEAWKW NSPQMKQMTS AISLQSRGMP ISVKIDGPAE PYWEQGKEIY YTRYGQLELA CASCHEVNMG KMIRADHLSQ GQINGFPTYR LADAGIVSIH QRFSGCIRDT RGEPFEAGSP EFRALELYVA SRGMTLPVEG LAVRQ
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