Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3912 |
Symbol | |
ID | 5085460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 813395 |
End bp | 814030 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640485470 |
Product | hypothetical protein |
Protein accession | YP_001170071 |
Protein GI | 146279913 |
COG category | [C] Energy production and conversion |
COG ID | [COG3258] Cytochrome c |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.411473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGAGAT TTCCTGAGCT TCTGCTGCTG ACGGCGCTGC TCTCCGCCCC TGCGGCCGCG GCCGAGGCCC CGCGCATCGG CCGGATCGCC CTGCCCGAAG AGGTCGCCGC CTGGGATCTC GACATCCGGC CCGACGGGTT TGGCTTGCCC GAAGGTTCGG GCGACGTGCT GACGGGGGAA GAGCTTTTTT CCGAACGCTG TGCCCTCTGC CACGGCGAGT TCGGCGAGGG AGTGGACAAC TGGCCCAAGC TGGCGGGCGG CCAGGGCACG CTCGATCACG ACGATCCGCA GAAGACCATC GGCAGCTACT GGCCCTATCT TTCGACCGCC TGGGATTACG TCCACCGCGC CATGCCCTTC GGGGATGCGC GCAGTCTGAC CAGCGATGAG ACCTACGCGA TCGTGGCCTA CCTGCTCTAC AACAACGATC TCGTGGACGA GGATTTCACC CTGTCACGCG AGAACTTCCT CGAGGTCGAG ATGCCGAACG CCGATGGCTT CTTCGTGGAC GACCGGGCGA CGACCGAGGT CCCGGCCTTC AGCCACCCTC CCTGCATGAC GGACTGCAAG CAGGAGGTCG AGATCACCAT GCACGCAACG GTGCTTGACG TGACCCCGGA CGATACGACG GACTGA
|
Protein sequence | MSRFPELLLL TALLSAPAAA AEAPRIGRIA LPEEVAAWDL DIRPDGFGLP EGSGDVLTGE ELFSERCALC HGEFGEGVDN WPKLAGGQGT LDHDDPQKTI GSYWPYLSTA WDYVHRAMPF GDARSLTSDE TYAIVAYLLY NNDLVDEDFT LSRENFLEVE MPNADGFFVD DRATTEVPAF SHPPCMTDCK QEVEITMHAT VLDVTPDDTT D
|
| |