| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3905 |
|---|
| Symbol | |
|---|
| ID | 5085453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 805032 |
|---|
| End bp | 805964 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640485463 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170064 |
|---|
| Protein GI | 146279906 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.251797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTC AAGGAAAAGT CGTCATCACC TGTGCCGTGA CGGGCGCGAT CCACACGCCC
TCGATGTCGC CGCACCTGCC GGTCACGGCC GCCGAGATCA CCGAGGCCGC CATCGGCGCC
GCCGAGGCGG GGGCCGCGGT CATCCACCTG CACGCCCGTT CGGAAATCGA CGGGCGCCCG
GATCAGAGCG TCGAGGCCTT CCGCCCGATC CTCGGCGTGA TCAAGCAGGC GACGGATGCG
GTGCTGAACA TCACCACCGG CGGCGCGCCC ACCATGTCGA TCGCCGAGCG GATCCAGCCC
GCGCAGCACT ACCGACCGGA GCTTGCCTCG CTGAACATGG GGACGATGAA CTTCGGCCTG
TTCCCGATGC TTGCCCGCTA TGACTCCGCG CTCCGTCACC AGTGGGAGCG GGACTACCTC
GGCAACAAGG ACATCATCTT CCGCAACACC TTCGGCGATG TCGAGCATGT GATGCAGACG
CTGGGCGAGG GCGGCACGCG CTTCGAGTTC GAATGCTATG ACACCTCGCA CCTCTACAAC
CTCAAGCATT TCTTCGACCG TGGGCTGGTG AAGGGGCCGC TGTTCATCCA GACCGTCTTC
GGGTTGATGG GCGGGATCGG CGCGCATCCC GACGACGTGC TGCACATGAA GCGGACGGCC
GACCGGCTGT TCGGCGACAG TTACCGCTGG TCGGTGCTGG GGGCCGGGCG CAACCAGCTT
GCCATTGCGG CCATGTCGGC GGCGATGGGG GGGCATGTGC GCGTGGGGCT CGAGGACAAC
CTGTGGGCGG GCAAGGGCCG GCTGGCCGAG AGCAATGCCC AGCAGGTGCG CGCGGCGCGT
CAGATCATCG AGGGGCTGGG TCTGGAGGTG GCGACCCCCG GCGAGGCGCG GGAGCTGCTG
GCGCTGAAGG GCGGCGATCA GGTGAACTTC TGA
|
|---|
| Protein sequence | MSLQGKVVIT CAVTGAIHTP SMSPHLPVTA AEITEAAIGA AEAGAAVIHL HARSEIDGRP
DQSVEAFRPI LGVIKQATDA VLNITTGGAP TMSIAERIQP AQHYRPELAS LNMGTMNFGL
FPMLARYDSA LRHQWERDYL GNKDIIFRNT FGDVEHVMQT LGEGGTRFEF ECYDTSHLYN
LKHFFDRGLV KGPLFIQTVF GLMGGIGAHP DDVLHMKRTA DRLFGDSYRW SVLGAGRNQL
AIAAMSAAMG GHVRVGLEDN LWAGKGRLAE SNAQQVRAAR QIIEGLGLEV ATPGEARELL
ALKGGDQVNF
|
|---|
| |