Gene Rsph17025_3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3868 
Symbol 
ID5085416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp767083 
End bp767655 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content65% 
IMG OID640485427 
Producthypothetical protein 
Protein accessionYP_001170028 
Protein GI146279870 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.477266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCT TCATCCGCTT TGCCGACCGG CTGTCGGCGG CTTTCGGTCA TGCCTTCGGC 
TGGCTCGTCG TCCTCATGAC CCTCGGCGTC AGCTACGAGG TTCTCGTCCG CTATGTCTTC
AACGCGCCGA CGCCCTGGTC GCTGGATGTG TCCTTCATCA TGTATGGCAC GCTCTTCATG
ATGGGCGGCG CCTACACGCT GTCGCGCAAC GGCCATGTGC GGGGCGACTT CCTCTACCGC
ATGTGGCGCC CGCGCACGCA GGCGGCGGTG GATCTCGTGC TCTACATCCT CTTCTTCTTT
CCGGGCATCA CCGCGCTGAT CCTGTCGGGC TGGAAATATT CCGCCCGGTC CTGGGGCTAT
GGCGAGGTGA GCGTGAACAG CCCCGCGGGC ATCCCGATCT ACCAGTTCAA GTCCGTGCTG
GTGGCGGCGG GGCTCTTGCT CTTCATCCAG GGGCTGGCCC AGGTCTGCCG CTGCATCCTC
TGCCTGCGCG ACGGCTACTG GCTGTCCGGC GAGGAGGATG TGGAGGAGAC CGAATCCGCC
CTCGCGCGCA ACCACGGCGG AGAGGCGACA TGA
 
Protein sequence
MRAFIRFADR LSAAFGHAFG WLVVLMTLGV SYEVLVRYVF NAPTPWSLDV SFIMYGTLFM 
MGGAYTLSRN GHVRGDFLYR MWRPRTQAAV DLVLYILFFF PGITALILSG WKYSARSWGY
GEVSVNSPAG IPIYQFKSVL VAAGLLLFIQ GLAQVCRCIL CLRDGYWLSG EEDVEETESA
LARNHGGEAT