Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3862 |
Symbol | |
ID | 5085410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 760997 |
End bp | 761659 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640485421 |
Product | hypothetical protein |
Protein accession | YP_001170022 |
Protein GI | 146279864 |
COG category | [S] Function unknown |
COG ID | [COG4991] Uncharacterized protein with a bacterial SH3 domain homologue |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCA GCAAGACGAT CTGGCTTTCC GCAGCGGCCG TGCTGCTCGC CGGCGCCGCC TCGGCCCAGG TGCAGGAAGC GCGTCCGATC ACGGATTTGA ACCTGCGCTC CGGCCCCGGC TCGAACTACA CGATCGTGGG TGTCGCGCCG CTGGATGCGC TGGTCATGGT CGAGGGCTGC GTCGAAGGTG CCAACTGGTG CCGCGTGAAC TACGAGGGCA CGTCGGGCTG GGCGGCGGGC AACTATCTCG CCATGTCGAT CGAGGAGACC GCCGTGCCGC TGGCCTCGGG CGATCCGCGC GTGACCTACG AGACCATGAC CTATGAGGAG GACAACGACG GCGCCAGCGT CCTCGCCGGC GGGGCCGCCG GTGCAGCCTC GGGCGCGGCG ATCGGCGGAC CCGCGGGCGC GCTGATCGGC GGCGTTCTTG GCATGGCGGG CGGCGACGCG CTCGATCCGC CCGATCGCAC CACCGTCACC TATGTGCAGG AGCATCCGGT CGAGCCGGTC TGGCTCGAAG GCGAGGTGGT GACCGGCGCG GCCATCCCCG ACACGGTCAC GCTGACGCCG ATCCCGGAGA GCACCTACTC CTACAGCTAT GTCAACGGCG TCCCGGTCAT CGTCGAGCCG CAGCAGCGCC AGATCATCCA CATCGTCCGC TGA
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Protein sequence | MIRSKTIWLS AAAVLLAGAA SAQVQEARPI TDLNLRSGPG SNYTIVGVAP LDALVMVEGC VEGANWCRVN YEGTSGWAAG NYLAMSIEET AVPLASGDPR VTYETMTYEE DNDGASVLAG GAAGAASGAA IGGPAGALIG GVLGMAGGDA LDPPDRTTVT YVQEHPVEPV WLEGEVVTGA AIPDTVTLTP IPESTYSYSY VNGVPVIVEP QQRQIIHIVR
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