Gene Rsph17025_3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3862 
Symbol 
ID5085410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp760997 
End bp761659 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID640485421 
Producthypothetical protein 
Protein accessionYP_001170022 
Protein GI146279864 
COG category[S] Function unknown 
COG ID[COG4991] Uncharacterized protein with a bacterial SH3 domain homologue 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCA GCAAGACGAT CTGGCTTTCC GCAGCGGCCG TGCTGCTCGC CGGCGCCGCC 
TCGGCCCAGG TGCAGGAAGC GCGTCCGATC ACGGATTTGA ACCTGCGCTC CGGCCCCGGC
TCGAACTACA CGATCGTGGG TGTCGCGCCG CTGGATGCGC TGGTCATGGT CGAGGGCTGC
GTCGAAGGTG CCAACTGGTG CCGCGTGAAC TACGAGGGCA CGTCGGGCTG GGCGGCGGGC
AACTATCTCG CCATGTCGAT CGAGGAGACC GCCGTGCCGC TGGCCTCGGG CGATCCGCGC
GTGACCTACG AGACCATGAC CTATGAGGAG GACAACGACG GCGCCAGCGT CCTCGCCGGC
GGGGCCGCCG GTGCAGCCTC GGGCGCGGCG ATCGGCGGAC CCGCGGGCGC GCTGATCGGC
GGCGTTCTTG GCATGGCGGG CGGCGACGCG CTCGATCCGC CCGATCGCAC CACCGTCACC
TATGTGCAGG AGCATCCGGT CGAGCCGGTC TGGCTCGAAG GCGAGGTGGT GACCGGCGCG
GCCATCCCCG ACACGGTCAC GCTGACGCCG ATCCCGGAGA GCACCTACTC CTACAGCTAT
GTCAACGGCG TCCCGGTCAT CGTCGAGCCG CAGCAGCGCC AGATCATCCA CATCGTCCGC
TGA
 
Protein sequence
MIRSKTIWLS AAAVLLAGAA SAQVQEARPI TDLNLRSGPG SNYTIVGVAP LDALVMVEGC 
VEGANWCRVN YEGTSGWAAG NYLAMSIEET AVPLASGDPR VTYETMTYEE DNDGASVLAG
GAAGAASGAA IGGPAGALIG GVLGMAGGDA LDPPDRTTVT YVQEHPVEPV WLEGEVVTGA
AIPDTVTLTP IPESTYSYSY VNGVPVIVEP QQRQIIHIVR