Gene Rsph17025_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3714 
Symbol 
ID5085580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp613655 
End bp617008 
Gene Length3354 bp 
Protein Length1117 aa 
Translation table11 
GC content68% 
IMG OID640485277 
Producthypothetical protein 
Protein accessionYP_001169886 
Protein GI146279728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTC TTGTCCTCGG TGCTGTCGGT TCCGCCATTG GCGGGGCCTT TGGCGGCGCA 
ATCCTCGGCT TTTCCGGGGC CGCCATCGGC GGCTTCATCG GCTCGACCGT CGGGTCGGTC
GTCGACAGCT GGATCGTGTC CTCGCTGGCG CCTGCCCAGA AGATCGAGGG CCAGCGGCTC
GACAGCCTGC GCATCACGTC GGCCACCGAA GGTGCCATTA TCCCTCGGCT CTATGGCCGG
ATGCGCATTG GCGGCAACAT CATCTGGGCG ACCGATTTCC GGGAGGAGAC CAAGACCACG
ACGCAGGGCG GCGGCAAGGG CGGCGGTGGT GGCAGGGTCC AGACGACGGA ATACCTGTAC
TATGCTTCCT TCGCCGTGGC GCTCTGCGAG GGCCCGATTA CTGGCATCGG CCGCATCTGG
GCCGACGGCA AGCCGCTCGA CATGACCGGC ATCACCTGGC GCTGGTATCC GGGGAACGAG
GCGCAAGCAG CCGACCCGTT CATTTCGGCA AGGATGGGGG CCGCCAACAC CCCGGCCTAT
CGCGGCACCG CCTACGTCGT TTTCGAGGAA CTGCCGCTTT CCACCTACGG CAACCGTCTG
CCGCAGCTCA GCTTCGAGGT GTTCCGGCCG CTCGCGGATC CCGACACGGC AGAGGGGCTG
GTCAAGGCGG TGACCATGAT CCCGGCCTCG GGCGAGTTCA CCTATGCGAC CGAAGCCGTG
CGCAAGACGG TCGGGGCAAC GACCACCATC TTCGGCCAGA CCACAGGCGG GACGACCTCG
GCCGAGAACC TGAACGCGCT GCCGGATGAG GCCGACATTG TCGTGGCGCT CGATCGGCTG
CAGGCCATGG CCCCGGCAGT CGAAAGCGTC AGCTTGGTCG TCGCCTGGTT CGGCAATGAC
CTCCGGGCGG GCAACTGCAC CATCAAGCCT GGCGTCGAGG TGGCAACGAA GGTCACCAGC
CCCAAGGTCT GGACGGTCAA TGGTGTGGCG CGGGCCAATG CGCATCTGGT CAGCCGGGAT
GCGGAAGACC GCCCGGTCTA TGGCGGCACG CCCGCCGACT TCGCGGTGGT GCAGGCCATC
CGCGAGATGA AGGCGCGCGG GTTGCGCGTC ACCTTCTATC CCTTCCTGCT GATGGACGTG
CCGCCCGGCA ACACGCTGCC GAACCCCTAT TCGAACAACG CCGCCACGCC GGGCCAGCCT
TCATTCCCCT GGCGCGGTCG GATCACCTGC TCCCCGGCGG CAAGCTTCGC GGGGACCGCG
GACAAGACTG CCGCCGCCGC GACGCAGGTC TCGGCCTTCT TCGGCGCGGC CATCCCGGCG
CAGTTCGCGG TGTCGGGCGA CACCGTCACA TGGACGGGCT CCTCCGGCGA TTGGGGTCTG
CGCCGGATGA TCCTGCACTA CGCCCATCTC TGCGCCGTCG CGGGCGGGGT CGATGCCTTC
CTGATCGGCA CCGAGATGCG CGGGCTGACA ACGATCCGGT CGAGCGCCAG CGCCTATCCT
GCCGTCACCG CCTTCAAGGC GCTGGCGGCG GATGTGAAGG CGGTGCTCGG GCCGGGCACC
AAGGTGGGCT ACGCCTCGGA CTGGTCGGAA TACTTCGGCC ATCAGCCCGG CGATGGCACG
GGAGACGTGT TCTTCCAACT CGACCCGCTC TGGTCGGATG CCAACATCGA TTTCATCGGC
ATCGACAACT ACATGCCGCT CTCCGACTGG CGCGACGGCT TCGACCATGC CGATACCCTC
GAGGGCTGGC CCGCGATCCA TGACCGAGGC TATCTGCAGG CCAACATCGC GGGTGGCGAG
GGCTTCGACT GGTTCTACGC CAGCACGGCC GACCGGTCGG CCCAGATCCG GACGCCCATC
ACCGACGGTG CCGCGGGCAA GCCTTGGGTC TTCCGCTACA AGGATCTTCG CGCCTGGTGG
TCGAACTTGC ATTTCAACCG CCCGGCCGGG GTGGAGAGCG GCACGCCCAC CGCATGGGTG
CCGCAGTCCA AGCCCGTCTG GTTCACCGAA CTTGGCTGCC CCGCTATCGA CCGGGGCACG
AACCAGCCGA ACGTGTTCTT CGACCCGAAG TCCTCGGAAA GCTTCACCCC GTACTTCTCG
CGTGGCTGGC GCGATGACGC GATCCAGCGC GCCTACCTCG AGGCAAGCTA CCTCTGGTGG
GGCCAAGGCG CGAACAACCC GATCTCGTCT GTTTACGGCG GCCGGATGGT GCATGTTCCG
GAATGCGCCG CCTGGACCTG GGATGCGCGG CCTTATCCGT TCTTCCCCGA ACTGACCGGC
GTCTGGACGG ACGGGCCGAA CTGGCGGCTC GGGCACTGGT TGACCGGGCG GCTGGGTGCG
GTGTCGCTGG CGGCTCTTGT CCGCCACCTC TGTCTGCGCG CTGGGCTCGA CGAAGCCCTC
ATCGACGTTT CCGGCCTGTG GGGCGCGGTC GAGGGCTATG TCATCGGCGC ACTTGAAAGC
CCCAGGGCGT CGATTTCCAC GCTGGCCCGC CACTTCGGCT TCGATGCCAT CGAGGCCGAA
GGCATGATCC GCTTTGTCAT GCGCGGCCGC GCCAGTGTGG CCACTCTGGC GATCGACGAT
CTGGTGTCCA GCCGGGAAGG CGAAGCCTTC GAACTGACCC GGGGCCAAGA GACAGAACTG
CCCCAGGCGC TGAAGTGGCA GGTCGCGCGG GCGGATGAGG ACTATGATGC AGCACTGGTC
GAGGCACGCC GCATCACCGT CGACACGACC CGCATCGCCT CCGAGAGCTT CCCGATGGCG
ATCCCGCCCG AGGAGGCCGA GCGCCGCTGC CGCCGCGCGC TGATGGAGGC CTGGATCGGC
CGGGAAAGCG CGGCCTTCCG CCTGCCACCT TCGCGGCTCG CCGTCGATCC GGCTGATGTG
ATCCGCCTCG CGCATGACGG ACGCGAGATC GAGTTCCGCC TCGTTTCCGT CGCCGATGCC
GAGGCGCGCG GCATCGAGGC AGTGCGCCAG GACCGTGCCG CCTACGACCT GCCGCCCGGC
GATCCGCGCC CGGCCTCACT CGCCAGCCCC GTCGTCTTCG GCACGCCGGA GGTGGTGATG
CTGGACCTGC CGCAAATCAG CGAGGACCAG CCCGCGCATC GCCCCCTGAT CGCCGCCCAT
GCCAGCCCCT GGCCGGGCGA GATCGCGGTC TTCCGCAGCG CATCAACGGA CGGGTTCAAC
CTCCTGACCA GATTCGGCAG TCGGGCGCGG ATCGGCACGC TGGCCTTCGA CTTCTTTTCG
GGGCCGACCT CGCGCTTCGA TCTGGGCAAC CAGCTGGTCG TTGATCTCCT GTCGGGGACG
CTGGAAAGCG TGACCGACGT CGCACTGTTC GGCGGGGCGA ATGCACTTGC GTAA
 
Protein sequence
MATLVLGAVG SAIGGAFGGA ILGFSGAAIG GFIGSTVGSV VDSWIVSSLA PAQKIEGQRL 
DSLRITSATE GAIIPRLYGR MRIGGNIIWA TDFREETKTT TQGGGKGGGG GRVQTTEYLY
YASFAVALCE GPITGIGRIW ADGKPLDMTG ITWRWYPGNE AQAADPFISA RMGAANTPAY
RGTAYVVFEE LPLSTYGNRL PQLSFEVFRP LADPDTAEGL VKAVTMIPAS GEFTYATEAV
RKTVGATTTI FGQTTGGTTS AENLNALPDE ADIVVALDRL QAMAPAVESV SLVVAWFGND
LRAGNCTIKP GVEVATKVTS PKVWTVNGVA RANAHLVSRD AEDRPVYGGT PADFAVVQAI
REMKARGLRV TFYPFLLMDV PPGNTLPNPY SNNAATPGQP SFPWRGRITC SPAASFAGTA
DKTAAAATQV SAFFGAAIPA QFAVSGDTVT WTGSSGDWGL RRMILHYAHL CAVAGGVDAF
LIGTEMRGLT TIRSSASAYP AVTAFKALAA DVKAVLGPGT KVGYASDWSE YFGHQPGDGT
GDVFFQLDPL WSDANIDFIG IDNYMPLSDW RDGFDHADTL EGWPAIHDRG YLQANIAGGE
GFDWFYASTA DRSAQIRTPI TDGAAGKPWV FRYKDLRAWW SNLHFNRPAG VESGTPTAWV
PQSKPVWFTE LGCPAIDRGT NQPNVFFDPK SSESFTPYFS RGWRDDAIQR AYLEASYLWW
GQGANNPISS VYGGRMVHVP ECAAWTWDAR PYPFFPELTG VWTDGPNWRL GHWLTGRLGA
VSLAALVRHL CLRAGLDEAL IDVSGLWGAV EGYVIGALES PRASISTLAR HFGFDAIEAE
GMIRFVMRGR ASVATLAIDD LVSSREGEAF ELTRGQETEL PQALKWQVAR ADEDYDAALV
EARRITVDTT RIASESFPMA IPPEEAERRC RRALMEAWIG RESAAFRLPP SRLAVDPADV
IRLAHDGREI EFRLVSVADA EARGIEAVRQ DRAAYDLPPG DPRPASLASP VVFGTPEVVM
LDLPQISEDQ PAHRPLIAAH ASPWPGEIAV FRSASTDGFN LLTRFGSRAR IGTLAFDFFS
GPTSRFDLGN QLVVDLLSGT LESVTDVALF GGANALA