Gene Rsph17025_3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3709 
Symbol 
ID5085575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp610492 
End bp611118 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content68% 
IMG OID640485272 
Productglycoside hydrolase family protein 
Protein accessionYP_001169881 
Protein GI146279723 
COG category[S] Function unknown 
COG ID[COG5448] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02217] conserved hypothetical protein TIGR02217 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCC ACGAGGTCCG GTTTCCGGAC AACATCAGCC GCGGGGCGCG GGGCGGCCCT 
GAGCGCCGCA CCCAGATCGT CGAACTGGCC AGCGGGGCCG AGGAGCGCAA TGCCAGCTGG
GCAAACAGCC GCCGCCGCTA CGACGTGGCC TATGGCATCC GCCGCGCCGA CGATCTGGCG
GCGGTCGTCG CATTCTTCGA GGCGCGGAAC GGCCGTCTCC ACGGCTTCCG TTTCAAGGAC
TGGGCAGATT TCAAATCCTG CCTGCCATCG CAGACGCCCA GCCCGACCAA CCAGCCGATA
GGCACCGGCA ACGGCGCGGC CACTCAGTTC CAACTTACCA AGCGCTACAC CTCCGGCGCG
CAGTCCTGGA GCCGCACCAT CACCAAGCCC GTCGCCGGGA CCGTCACCGT CGCACTGAAC
GGCACGCCGC AGGCCTCCGG CTGGTCGGTT TCCACGACCT CCGGCCTCGT CACCTTCACC
ACCGCCCCGG CCGCTGGCAT CGCGATCAGC GCGGGCTTCG AATTCGACGT GCCGGTGCGT
TTCGACACCG ACACCCTCGA CGTCACCCTC GACCTCGAAC GCCTCGGCTC GATCACCTCG
ATCCCTCTCA TCGAACTCCG CCTCTGA
 
Protein sequence
MAFHEVRFPD NISRGARGGP ERRTQIVELA SGAEERNASW ANSRRRYDVA YGIRRADDLA 
AVVAFFEARN GRLHGFRFKD WADFKSCLPS QTPSPTNQPI GTGNGAATQF QLTKRYTSGA
QSWSRTITKP VAGTVTVALN GTPQASGWSV STTSGLVTFT TAPAAGIAIS AGFEFDVPVR
FDTDTLDVTL DLERLGSITS IPLIELRL