Gene Rsph17025_3673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3673 
Symbol 
ID5085533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp568321 
End bp569031 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID640485231 
Producthypothetical protein 
Protein accessionYP_001169846 
Protein GI146279688 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.915645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTG CCCCCCGTGG CCGCAGCGCC GGCTTTGCGC CGAGCGCCTA CTACGACGAG 
GGCCTGCGCG CCCACATGCT GCGCATCTAC AACTACATGG GCCTCGGGCT CGCGCTGACC
GGCCTCGTGG CCGTGGTCGT CGCGGCCACG CCCGCCATCT ATGTGCCGAT CTTCTCGACC
CCGCTGAAAT GGGTCGTGAT GCTGGCGCCG TTGGCCTTCG TGCTCTTCCT GTCCTTCCGC
ATCGAGGCCA TCTCGGCCGG CACCGCGCAG ATGCTCTTCT GGGCCTTCTG CGGCGTGATG
GGCCTGTCGC TCGCCTCGAT CTTCCTGGTC TTCACCGGAA CCTCGATCGC GCGCGCCTTC
TTCGGTGCGG CGGCCATGTT CGCCGGCATG AGCCTTTACG GCTACACCAC CAAGCGCGAC
CTGAGCCAGT TCGGCAGTTT CCTGATGATG GGCCTGATCG GCGTCATCAT CGCGAGCGTC
ATCAACCTCT TCCTCGGCTC GTCCGCGCTG CAGTTCGCGA TCTCGATCAT CGGCATCCTG
GTCTTCGTCG GCCTGACCGC CTGGGACACC CAGTCGATCA AGCTGCAATA TGCCGAGCAC
CACGATTCCG AGACGTCGCA GAAACTTGCC GTCATGGGGG CGCTGTCGCT CTACCTGAAC
TTCATCAACA TCTTCCAACT CCTGCTCTCG CTCACGGGCG AGCGCGAGTA A
 
Protein sequence
MNPAPRGRSA GFAPSAYYDE GLRAHMLRIY NYMGLGLALT GLVAVVVAAT PAIYVPIFST 
PLKWVVMLAP LAFVLFLSFR IEAISAGTAQ MLFWAFCGVM GLSLASIFLV FTGTSIARAF
FGAAAMFAGM SLYGYTTKRD LSQFGSFLMM GLIGVIIASV INLFLGSSAL QFAISIIGIL
VFVGLTAWDT QSIKLQYAEH HDSETSQKLA VMGALSLYLN FINIFQLLLS LTGERE