Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3673 |
Symbol | |
ID | 5085533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 568321 |
End bp | 569031 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640485231 |
Product | hypothetical protein |
Protein accession | YP_001169846 |
Protein GI | 146279688 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.915645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCTG CCCCCCGTGG CCGCAGCGCC GGCTTTGCGC CGAGCGCCTA CTACGACGAG GGCCTGCGCG CCCACATGCT GCGCATCTAC AACTACATGG GCCTCGGGCT CGCGCTGACC GGCCTCGTGG CCGTGGTCGT CGCGGCCACG CCCGCCATCT ATGTGCCGAT CTTCTCGACC CCGCTGAAAT GGGTCGTGAT GCTGGCGCCG TTGGCCTTCG TGCTCTTCCT GTCCTTCCGC ATCGAGGCCA TCTCGGCCGG CACCGCGCAG ATGCTCTTCT GGGCCTTCTG CGGCGTGATG GGCCTGTCGC TCGCCTCGAT CTTCCTGGTC TTCACCGGAA CCTCGATCGC GCGCGCCTTC TTCGGTGCGG CGGCCATGTT CGCCGGCATG AGCCTTTACG GCTACACCAC CAAGCGCGAC CTGAGCCAGT TCGGCAGTTT CCTGATGATG GGCCTGATCG GCGTCATCAT CGCGAGCGTC ATCAACCTCT TCCTCGGCTC GTCCGCGCTG CAGTTCGCGA TCTCGATCAT CGGCATCCTG GTCTTCGTCG GCCTGACCGC CTGGGACACC CAGTCGATCA AGCTGCAATA TGCCGAGCAC CACGATTCCG AGACGTCGCA GAAACTTGCC GTCATGGGGG CGCTGTCGCT CTACCTGAAC TTCATCAACA TCTTCCAACT CCTGCTCTCG CTCACGGGCG AGCGCGAGTA A
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Protein sequence | MNPAPRGRSA GFAPSAYYDE GLRAHMLRIY NYMGLGLALT GLVAVVVAAT PAIYVPIFST PLKWVVMLAP LAFVLFLSFR IEAISAGTAQ MLFWAFCGVM GLSLASIFLV FTGTSIARAF FGAAAMFAGM SLYGYTTKRD LSQFGSFLMM GLIGVIIASV INLFLGSSAL QFAISIIGIL VFVGLTAWDT QSIKLQYAEH HDSETSQKLA VMGALSLYLN FINIFQLLLS LTGERE
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