| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3666 |
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| Symbol | |
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| ID | 5085526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 560076 |
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| End bp | 562277 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640485224 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169839 |
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| Protein GI | 146279681 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.611695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.775877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGGC CCCGATCGTC CGTGTCGCTC TCGGCGCAAC TCGTCGCCGC AATCCTGATC
TCCTGCCTGA TCGCCACGAT CTCGGTCCTG TTCCTCAGCT TCACCGCCGT CCGCGCTGTC
GATGCCGATG CCGAAGCCCG CCAGTTGCGC TTTGCAAACC GCGCCATCGA GGAGGAGGCC
CGGCGGATCG TCTCCGAACA ACAGGTATCG ACCGTCTGGA ACGAAGCGGT CGATCGCGTC
AAGGCCGTCG ATCACGACTG GATGGAGAAC AATCTCGGCG CCTGGATGCA CCAGCAGTAC
GGGCACGACG AAAGTTATGT GGTCGATACC GGCAACCATC CGATCCATCT CGCGCGCGAG
GGCATGACGG TGCGGCCGGG GCCCGCGGCC GCCCTTCCCC CACCCCTCGC CGAACTCGCG
CAGGACCTGC GCTCCGAGAT GCAGCGGGTC ACGCGGGATG AAGCGGACTC CACCCCGGAT
ATCGCCGATC TTTCGCTGTC GCGGTTCCTG CTGCTGAACG GCAAACCGGC CCTCGCCGGC
GTCGTTCCCA TCGTGCCCGA CAAGCCCGAC CTCACGCAGC GGGCGGGGAC GGAGTATCTG
CATCTGGCCA TCCAGTTCGC CGACGCCGAC ATGGCCGAGC GGTTTTCCTC GACCTTCGAG
TTCGACGGCG CCGCCTTTTC GGTGTCCCCC GGCCCCGAGG ACAGGCTCTC CGTTCCGGTC
AGGGACGCGG CGGGTGACGC CATTGCCTGG TTCGTCTGGC GCGCCGATCG CCCCGGCCAT
CGGCTCGTGG ATGAGATGCT GCCGGTCGTC ACGCTCTTCG CCGCCTTCGG AGCCGGGCTT
CTGGCCTGGC TCCTGCGGCG CCTCTGGTCC GCGTCGCGCC GCCTGCACCA GAGCGAGGAG
GAGGCCCGCT ATCTGGCGAT GCATGACCCG CTGGCCGGGA TACCGAACCG CACGCTCTTC
GAGGATCGGC TCGATCAGGC GCTGAAGGCC GAGAAGCGCG GCGGGCCGCC CGTCGCGCTG
CTTTGCCTCG ACCTTGACCG ATTCAAGGCC ATCAACGACA CGTTGGGCCA TCCGGCAGGC
GACGAGCTGA TCCGGCAGAT GGCGGGACGG CTCTGCTCGC ATGTGCGCGA GACCGACACG
GTGGCGCGGC TCGGAGGTGA CGAGTTCGGC GTGATCCTGA TCGGCATGGG CAGCGAGGAA
ACGCTCGCGC GCTATTGCAG CGGCCTCATC CACCTGCTCT CGGCGCCCTG CGACCTCAAG
ACAGGCCAGG TTCAGATCAG CGCCAGCATC GGCGCGGCCT GTGCGGCGCG CTTCGACGGC
GGGATGGAGG CGCTGATGCA AAGCGCCGAC GCCGCGCTCT ACCGCGCCAA GGCGGACGGG
CGCGGGCGCT TCTGCATCGC CACGCCTGAA ATGAACGACA TGTTCCGTCT CCGCCACGAG
ATCGAGCGCG ACCTGCGGCG GGCCGTTGCC GAAGGTGGCC AGTTCCAGGT GCTCTACCAG
CCCATCTTCG ATGCCGAGGG CGGCATGGTG GCCGCCGAGG CGCTGGTGCG CTGGACCCAC
CCCGTCCGCG GCGTGCTGGG ACCGGAGAGC TTCATCGGCA TTGCCGAGGA CACCGGCCTG
ATCGAGCCGA TCGGCCTTTG GGTGCTCGAT CAGGCCTGCG TCCTGGCGGC AACATCCGGC
CTGCCGAAGA TCTCGGTCAA TGTCTCACCG ATCCAGCTGC GCCGCGCGGG CTTTGCAGAG
GAGGTGCTGG CGCGGCTTGC GGCCCACCGT CTTCCGGGCC ACCGGCTGGA ACTGGAGGTC
ACCGAGAAAC GCGCGCTCGA CACCGGAAGC GAGACCCTGT CGAACTTCGA TCGGCTCCGG
GCTGCCGGCG TGTCGATCGC GCTGGACGAC TTTGCCACCG GCCAGTCGCT CCTGCGCTAT
GTCCGCGACT ACCAGATCGA CACGATCAAG ATCGACCGCT CGTTCGTGGC CCGGCTGGGC
AGCGGCGACG GGACGGACCA GATCGTGCGC GCGATTCTCG ACCTTGGGCG GGCGATGGGG
ATCGAGGTCA CGGCCGAGGG CGTCGAGAAC GCAGCGCAGC GCGAGGCCCT GCTCGGAATG
GGGTGCCATG TGTTCCAGGG CTTCCTGCTC GGCCGGCCGA TGGATGCCCT GCGACTCGCA
GCCCTGAGCG CCCGCCACCG CCCTTCGCAG AAAAGCGCCT GA
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| Protein sequence | MDRPRSSVSL SAQLVAAILI SCLIATISVL FLSFTAVRAV DADAEARQLR FANRAIEEEA
RRIVSEQQVS TVWNEAVDRV KAVDHDWMEN NLGAWMHQQY GHDESYVVDT GNHPIHLARE
GMTVRPGPAA ALPPPLAELA QDLRSEMQRV TRDEADSTPD IADLSLSRFL LLNGKPALAG
VVPIVPDKPD LTQRAGTEYL HLAIQFADAD MAERFSSTFE FDGAAFSVSP GPEDRLSVPV
RDAAGDAIAW FVWRADRPGH RLVDEMLPVV TLFAAFGAGL LAWLLRRLWS ASRRLHQSEE
EARYLAMHDP LAGIPNRTLF EDRLDQALKA EKRGGPPVAL LCLDLDRFKA INDTLGHPAG
DELIRQMAGR LCSHVRETDT VARLGGDEFG VILIGMGSEE TLARYCSGLI HLLSAPCDLK
TGQVQISASI GAACAARFDG GMEALMQSAD AALYRAKADG RGRFCIATPE MNDMFRLRHE
IERDLRRAVA EGGQFQVLYQ PIFDAEGGMV AAEALVRWTH PVRGVLGPES FIGIAEDTGL
IEPIGLWVLD QACVLAATSG LPKISVNVSP IQLRRAGFAE EVLARLAAHR LPGHRLELEV
TEKRALDTGS ETLSNFDRLR AAGVSIALDD FATGQSLLRY VRDYQIDTIK IDRSFVARLG
SGDGTDQIVR AILDLGRAMG IEVTAEGVEN AAQREALLGM GCHVFQGFLL GRPMDALRLA
ALSARHRPSQ KSA
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