Gene Rsph17025_3637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3637 
Symbol 
ID5085496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp524015 
End bp524992 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content68% 
IMG OID640485194 
Producthypothetical protein 
Protein accessionYP_001169810 
Protein GI146279652 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCG GACACGATCT TGAACTGGTT CATGTGACGA AGCGGTATGG GACGTCTGCG 
GTCGCGGTGG AGGATGTGAG CCACCTGTTC CGCGGCGGAA GCTACGTCTG CCTGCTGGGG
CCGTCGGGCT GCGGCAAGTC CTCGACGCTG CGGATGATCG CGGGGCACGA GACGGTGAGC
GAAGGCTCGA TCCTGCTCTC GGGCAAGGAT GTGACGGCGT TGCCCCCGGC GCGGCGCGGC
ACGGCGATGA TGTTCCAGAA CTACGCTCTG TTCCCGCATC TGTCCGTGAC GGACAATGTC
GCCTTCAGCC TGAAGATGAA GGGCATCGCC GCGGCCGAGC GGCGGGCCAA GGCGGCCGGG
ATGCTCGAAC TGGTGGACAT GGCCCGCTAT GGCGACCGCC TGCCGGCCCA GCTTTCGGGC
GGTCAGCAGC AGCGCGTGGC GCTGGCGCGG GCGCTGATCA CCGGGCCGCA GGTGCTGCTT
CTGGACGAGC CGCTCTCGGC GCTCGATCCG TTCCTGCGCA TCCGCATGCG GGCCGAGCTG
AAGCGGCTGC AGCGCGAGCT GGGGATCTCG TTCATCCATG TCACCCACGG CCAGGACGAG
GCGCTGGCGC TGGCCGACGA GGTCGTGGTG ATGAACGACG CGAGGATCGA GCAGGCCGGC
CCCGCGCGCG AGGTGTTCAA CGCGCCGCGA ACCGAGTTCG TCGCCCGCTT CATGGGCGGC
CACAATGTCA TCGGCCTGCC TCACGGTCGC TTCGCCATCC GCTGCGACGA TATCCGTCTT
GATCCCGCCG GGCAGGAGGG AGTGGTGCAG GCCGTCGAAT ATCAGGGCGC CCACGTCGCG
CTGACGGTCC GGGCGGTGGG CGATCAGGAG ATCGTGGCGC TGATCCCCGA AGCCGCCTTC
TTCGAGCAAC CGAAAAACCC CGGCGAGGCT GTCCGCCTGT CGTGGGACGA GGGGCGGCTG
CACCGCCTTC ACGCATGA
 
Protein sequence
MRGGHDLELV HVTKRYGTSA VAVEDVSHLF RGGSYVCLLG PSGCGKSSTL RMIAGHETVS 
EGSILLSGKD VTALPPARRG TAMMFQNYAL FPHLSVTDNV AFSLKMKGIA AAERRAKAAG
MLELVDMARY GDRLPAQLSG GQQQRVALAR ALITGPQVLL LDEPLSALDP FLRIRMRAEL
KRLQRELGIS FIHVTHGQDE ALALADEVVV MNDARIEQAG PAREVFNAPR TEFVARFMGG
HNVIGLPHGR FAIRCDDIRL DPAGQEGVVQ AVEYQGAHVA LTVRAVGDQE IVALIPEAAF
FEQPKNPGEA VRLSWDEGRL HRLHA